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Publications (10 of 24) Show all publications
Potapov, A. M., Chen, T.-W., Striuchkova, A. V., Alatalo, J. M., Alexandre, D., Arbea, J., . . . Scheu, S. (2024). Global fine-resolution data on springtail abundance and community structure. Scientific Data, 11(1), Article ID 22.
Open this publication in new window or tab >>Global fine-resolution data on springtail abundance and community structure
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2024 (English)In: Scientific Data, E-ISSN 2052-4463, Vol. 11, no 1, article id 22Article in journal (Refereed) Published
Abstract [en]

Springtails (Collembola) inhabit soils from the Arctic to the Antarctic and comprise an estimated ~32% of all terrestrial arthropods on Earth. Here, we present a global, spatially-explicit database on springtail communities that includes 249,912 occurrences from 44,999 samples and 2,990 sites. These data are mainly raw sample-level records at the species level collected predominantly from private archives of the authors that were quality-controlled and taxonomically-standardised. Despite covering all continents, most of the sample-level data come from the European continent (82.5% of all samples) and represent four habitats: woodlands (57.4%), grasslands (14.0%), agrosystems (13.7%) and scrublands (9.0%). We included sampling by soil layers, and across seasons and years, representing temporal and spatial within-site variation in springtail communities. We also provided data use and sharing guidelines and R code to facilitate the use of the database by other researchers. This data paper describes a static version of the database at the publication date, but the database will be further expanded to include underrepresented regions and linked with trait data.

Place, publisher, year, edition, pages
Nature Publishing Group, 2024
National Category
Ecology
Identifiers
urn:nbn:se:umu:diva-219508 (URN)10.1038/s41597-023-02784-x (DOI)38172139 (PubMedID)2-s2.0-85181767009 (Scopus ID)
Funder
German Research Foundation (DFG), 493345801German Research Foundation (DFG), 192626868German Research Foundation (DFG), SFB 990Carl Tryggers foundation German Research Foundation (DFG), SFB 990-192626868EU, European Research Council, 677232EU, European Research Council, 677232German Research Foundation (DFG), 316045089German Research Foundation (DFG), 192 626 868German Research Foundation (DFG), 192626868—SFB 990
Available from: 2024-01-22 Created: 2024-01-22 Last updated: 2024-01-22Bibliographically approved
Larsbo, M., Koestel, J., Krab, E. J. & Klaminder, J. (2024). Quantifying earthworm soil ingestion from changes in vertical bulk density profiles. European journal of soil biology, 120, Article ID 103574.
Open this publication in new window or tab >>Quantifying earthworm soil ingestion from changes in vertical bulk density profiles
2024 (English)In: European journal of soil biology, ISSN 1164-5563, E-ISSN 1778-3615, Vol. 120, article id 103574Article in journal (Refereed) Published
Abstract [en]

Soil mixing by earthworms can have a large impact on the fate of nutrients and pollutants and on the soil's ability to sequester carbon. Nevertheless, methods to quantify earthworm ingestion and egestion under field conditions are largely lacking. Soils of the Fennoscandian tundra offer a special possibility for such quantifications, as these soils commonly lack burrowing macrofauna and exhibit a well-defined O horizon with low bulk density on top of a mineral soil with higher density. Since ingestion-egestion mixes the two soil layers, the temporal changes in the bulk density profile of such soils may be useful for estimating field ingestion rates. In this study, we applied a model for earthworm burrowing through soil ingestion to observed changes in soil densities occurring in a mesocosm experiment carried out in the arctic during four summers with intact soil. The earthworms present in the mesocosms were Aporrectodea trapezoides, Aporrectodea tuberculata, Aporrectodea rosea, Lumbricus rubellus and Lumbricus Terrestris (fourth season only). We show that changes in soil density profiles can indeed be used to infer earthworm ingestion rates that are realistic in comparison to literature values. Although uncertainties in parameter values were sometimes large, the results from this study suggest that soil turnover rates and endogeic earthworm soil ingestion rates in tundra heath and meadow soils may be as high as those reported for temperate conditions. Such large ingestion rates can explain observed large morphological changes in arctic soils where dispersing earthworms have resulted in complete inmixing of the organic layer into the mineral soil. Our approach is applicable to soil profiles with marked vertical differences in bulk density such as the soils of the Fennoscandian tundra where earthworms are currently dispersing into new areas and to layered repacked soil samples that are incubated in the field.

Place, publisher, year, edition, pages
Elsevier, 2024
National Category
Soil Science Ecology
Identifiers
urn:nbn:se:umu:diva-218630 (URN)10.1016/j.ejsobi.2023.103574 (DOI)2-s2.0-85179614919 (Scopus ID)
Funder
Swedish Research Council Formas, 201-01312
Available from: 2023-12-27 Created: 2023-12-27 Last updated: 2023-12-27Bibliographically approved
Potapov, A. M., Guerra, C. A., van den Hoogen, J., Babenko, A., Bellini, B. C., Berg, M. P., . . . Scheu, S. (2023). Globally invariant metabolism but density-diversity mismatch in springtails. Nature Communications, 14(1), Article ID 674.
Open this publication in new window or tab >>Globally invariant metabolism but density-diversity mismatch in springtails
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2023 (English)In: Nature Communications, E-ISSN 2041-1723, Vol. 14, no 1, article id 674Article in journal (Refereed) Published
Abstract [en]

Soil life supports the functioning and biodiversity of terrestrial ecosystems. Springtails (Collembola) are among the most abundant soil arthropods regulating soil fertility and flow of energy through above- and belowground food webs. However, the global distribution of springtail diversity and density, and how these relate to energy fluxes remains unknown. Here, using a global dataset representing 2470 sites, we estimate the total soil springtail biomass at 27.5 megatons carbon, which is threefold higher than wild terrestrial vertebrates, and record peak densities up to 2 million individuals per square meter in the tundra. Despite a 20-fold biomass difference between the tundra and the tropics, springtail energy use (community metabolism) remains similar across the latitudinal gradient, owing to the changes in temperature with latitude. Neither springtail density nor community metabolism is predicted by local species richness, which is high in the tropics, but comparably high in some temperate forests and even tundra. Changes in springtail activity may emerge from latitudinal gradients in temperature, predation and resource limitation in soil communities. Contrasting relationships of biomass, diversity and activity of springtail communities with temperature suggest that climate warming will alter fundamental soil biodiversity metrics in different directions, potentially restructuring terrestrial food webs and affecting soil functioning.

Place, publisher, year, edition, pages
Springer Nature, 2023
National Category
Soil Science Ecology
Identifiers
urn:nbn:se:umu:diva-204916 (URN)10.1038/s41467-023-36216-6 (DOI)36750574 (PubMedID)2-s2.0-85147615208 (Scopus ID)
Funder
Carl Tryggers foundation EU, European Research CouncilEU, Horizon 2020, 677232
Note

The article is an outcome of the #GlobalCollembola community initiative that is voluntarily supported by researchers around the world.

Available from: 2023-02-16 Created: 2023-02-16 Last updated: 2023-03-28Bibliographically approved
Klaminder, J., Krab, E. J., Larsbo, M., Jonsson, H., Fransson, J. & Koestel, J. (2023). Holes in the tundra: Invasive earthworms alter soil structure and moisture in tundra soils. Science of the Total Environment, 859, Article ID 160125.
Open this publication in new window or tab >>Holes in the tundra: Invasive earthworms alter soil structure and moisture in tundra soils
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2023 (English)In: Science of the Total Environment, ISSN 0048-9697, E-ISSN 1879-1026, Vol. 859, article id 160125Article in journal (Refereed) Published
Abstract [en]

Human introductions have resulted in earthworms establishing in the Arctic, species known to cause cascading ecosystem change. However, few quantitative outdoor experiments have been performed that describe how these soil modifying earthworms are reshaping structures in tundra soils. In this study, we used three-dimensional (3-D) X-ray images of soil cores (approximately 10 cm diameter, 20 cm height, N = 48) to assess how earthworms (Aporrectodea sp. and Lumbricus sp.) affect soil structure and macropore networks in an outdoor mesocosm experiment that lasted four summers. Effects were assessed in both shrub-dominated (heath) and herb-dominated (meadow) tundra. Earthworms almost doubled the macroporosity in meadow soils and tripled macroporosity in heath. Interestingly, the fractal dimension of macropores decreased in response to earthworm burrowing in both systems, indicating that the presence of earthworms reduced the geometric complexity in comparison to other pore-generating processes active in the tundra. Observed effects on soil structure occurred along with a dramatically reduced soil moisture content, which was observed the first winter after earthworm introduction in the meadow. Our findings suggest that predictions of future changes in vegetation and soil carbon pools in the Arctic should include major impacts on soil properties that earthworms induce.

Place, publisher, year, edition, pages
Elsevier, 2023
Keywords
3D, Abisko, Bioturbation, Heath, Long-term, Meadow, Soil-mixing
National Category
Soil Science Ecology
Identifiers
urn:nbn:se:umu:diva-201338 (URN)10.1016/j.scitotenv.2022.160125 (DOI)000898837900015 ()36379337 (PubMedID)2-s2.0-85142356755 (Scopus ID)
Funder
Swedish Research CouncilSwedish Research Council Formas
Available from: 2022-12-14 Created: 2022-12-14 Last updated: 2024-07-02Bibliographically approved
Blume-Werry, G., Klaminder, J., Krab, E. J. & Onteux, S. (2023). Ideas and perspectives: Alleviation of functional limitations by soil organisms is key to climate feedbacks from arctic soils. Biogeosciences, 20(10), 1979-1990
Open this publication in new window or tab >>Ideas and perspectives: Alleviation of functional limitations by soil organisms is key to climate feedbacks from arctic soils
2023 (English)In: Biogeosciences, ISSN 1726-4170, E-ISSN 1726-4189, Vol. 20, no 10, p. 1979-1990Article in journal (Refereed) Published
Abstract [en]

Arctic soils play an important role in Earth's climate system, as they store large amounts of carbon that, if released, could strongly increase greenhouse gas levels in our atmosphere. Most research to date has focused on how the turnover of organic matter in these soils is regulated by abiotic factors, and few studies have considered the potential role of biotic regulation. However, arctic soils are currently missing important groups of soil organisms, and here, we highlight recent empirical evidence that soil organisms' presence or absence is key to understanding and predicting future climate feedbacks from arctic soils. We propose that the arrival of soil organisms into arctic soils may introduce "novel functions", resulting in increased rates of, for example, nitrification, methanogenesis, litter fragmentation, or bioturbation, and thereby alleviate functional limitations of the current community. This alleviation can greatly enhance decomposition rates, in parity with effects predicted due to increasing temperatures. We base this argument on a series of emerging experimental evidence suggesting that the dispersal of until-then absent micro-, meso-, and macroorganisms (i.e. from bacteria to earthworms) into new regions and newly thawed soil layers can drastically affect soil functioning. These new observations make us question the current view that neglects organism-driven "alleviation effects"when predicting future feedbacks between arctic ecosystems and our planet's climate. We therefore advocate for an updated framework in which soil biota and the functions by which they influence ecosystem processes become essential when predicting the fate of soil functions in warming arctic ecosystems.

Place, publisher, year, edition, pages
Copernicus Publications, 2023
National Category
Soil Science
Identifiers
urn:nbn:se:umu:diva-212060 (URN)10.5194/bg-20-1979-2023 (DOI)000998715900001 ()2-s2.0-85163878232 (Scopus ID)
Funder
Swedish Research Council, 2021-04458Swedish Research Council Formas, 2018-01312
Available from: 2023-07-18 Created: 2023-07-18 Last updated: 2023-07-18Bibliographically approved
Väisänen, M., Klaminder, J., Ylänne, H., Teuber, L., Dorrepaal, E. & Krab, E. J. (2023). Tundra cryogenic land surface processes and CO2–C balance in sub-Arctic alpine environment withstand winter and spring warming. Environmental Research: Climate, 2(2), Article ID 021001.
Open this publication in new window or tab >>Tundra cryogenic land surface processes and CO2–C balance in sub-Arctic alpine environment withstand winter and spring warming
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2023 (English)In: Environmental Research: Climate, E-ISSN 2752-5295, Vol. 2, no 2, article id 021001Article in journal (Refereed) Published
Abstract [en]

Cryogenic land surface processes (CLSPs), such as cryoturbation, are currently active in landscapes covering 25% of our planet where they dictate key functions, such as carbon (C) cycling, and maintain patterned landscape features. While CLSPs are expected to diminish in the near future due to milder winters especially in the southern parts of the Arctic, the shifts in C cycling in these landscapes may be more complex, since climate change can affect C cycling directly but also indirectly via CLSPs. Here, we study the effects of changing winter and spring climate on CLSPs and C cycling in non-sorted circles consisting of barren frost boils and their vegetated rims. We do this by measuring cryoturbation and ecosystem CO2 fluxes repeatedly in alpine subarctic tundra where temperatures during naturally snow covered period have been experimentally increased with snow-trapping fences and temperatures during winter and spring period after snowmelt have been increased with insulating fleeces. Opposite to our hypothesis, warming treatments did not decrease cryoturbation. However, winter warming via deeper snow increased ecosystem C sink during summer by decreasing ecosystem CO2 release in the frost boils and by counterbalancing the negative effects of cryoturbation on plant CO2 uptake in the vegetated rims. Our results suggest that short-term changes in winter and spring climate may not alter cryoturbation and jeopardize the tundra C sink.

Place, publisher, year, edition, pages
Institute of Physics Publishing (IOPP), 2023
Keywords
non-sorted circle, differential heave, greenhouse gas, snow fence, greenness, light-response, modeling
National Category
Climate Research Physical Geography
Identifiers
urn:nbn:se:umu:diva-220232 (URN)10.1088/2752-5295/acc08b (DOI)
Funder
Swedish Research Council Formas, 2017-01182Knut and Alice Wallenberg Foundation, KAW 2012.0152Swedish Research Council, 621-2011-5444
Available from: 2024-01-30 Created: 2024-01-30 Last updated: 2024-01-31Bibliographically approved
Jessen, M.-T., Krab, E. J., Lett, S., Nilsson, M.-C., Teuber, L., Wardle, D. A. & Dorrepaal, E. (2023). Understory functional groups and fire history but not experimental warming drive tree seedling performance in unmanaged boreal forests. Frontiers in Forests and Global Change, 6, Article ID 1130532.
Open this publication in new window or tab >>Understory functional groups and fire history but not experimental warming drive tree seedling performance in unmanaged boreal forests
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2023 (English)In: Frontiers in Forests and Global Change, E-ISSN 2624-893X, Vol. 6, article id 1130532Article in journal (Refereed) Published
Abstract [en]

Introduction: Survival and growth of tree seedlings are key processes of regeneration in forest ecosystems. However, little is known about how climate warming modulates seedling performance either directly or in interaction with understory vegetation and post-fire successional stages.

Methods: We measured survival (over 3 years) and growth of seedlings of three tree species (Betula pubescens, Pinus sylvestris, and Picea abies) in a full-factorial field experiment with passive warming and removal of two plant functional groups (feather moss and/or ericaceous shrubs) along a post-fire chronosequence in an unmanaged boreal forest.

Results: Warming had no effect on seedling survival over time or on relative biomass growth. Meanwhile, moss removal greatly increased seedling survival overall, while shrub removal canceled this effect for B. pubescens seedlings. In addition, B. pubescens and P. sylvestris survival benefitted most from moss removal in old forests (>260 years since last fire disturbance). In contrast to survival, seedling growth was promoted by shrub removal for two out of three species, i.e., P. sylvestris and P. abies, meaning that seedling survival and growth are governed by different understory functional groups affecting seedling performance through different mechanism and modes of action.

Discussion: Our findings highlight that understory vegetation and to a lesser extent post-fire successional stage are important drivers of seedling performance while the direct effect of climate warming is not. This suggests that tree regeneration in future forests may be more responsive to changes in understory vegetation or fire regime, e.g., indirectly caused by warming, than to direct or interactive effects of rising temperatures.

Place, publisher, year, edition, pages
Frontiers Media S.A., 2023
Keywords
climate change, forest fire, forest regeneration, moss, plant functional group removal, shrubs, survival
National Category
Forest Science Ecology
Identifiers
urn:nbn:se:umu:diva-209166 (URN)10.3389/ffgc.2023.1130532 (DOI)000994826400001 ()2-s2.0-85160109116 (Scopus ID)
Funder
The Kempe Foundations, JCK-1112Swedish Research Council, 621-2011-5444Knut and Alice Wallenberg Foundation, 2012.0152
Available from: 2023-06-26 Created: 2023-06-26 Last updated: 2024-06-11Bibliographically approved
Monteux, S., Mariën, J. & Krab, E. J. (2022). Dispersal of bacteria and stimulation of permafrost decomposition by Collembola. Biogeosciences, 19(17), 4089-4105
Open this publication in new window or tab >>Dispersal of bacteria and stimulation of permafrost decomposition by Collembola
2022 (English)In: Biogeosciences, ISSN 1726-4170, E-ISSN 1726-4189, Vol. 19, no 17, p. 4089-4105Article in journal (Refereed) Published
Abstract [en]

Contrary to most soils, permafrost soils have the atypical feature of being almost entirely deprived of soil fauna. Abiotic constraints on the fate of permafrost carbon after thawing are increasingly understood, but biotic constraints remain scarcely investigated. Incubation studies, essential to estimate effects of permafrost thaw on carbon cycling, typically measure the consequences of permafrost thaw in isolation from the topsoil and thus do not account for the effects of altered biotic interactions because of e.g. colonization by soil fauna. Microarthropods facilitate the dispersal of microorganisms in soil, both on their cuticle (ectozoochory) and through their digestive tract (endozoochory), which may be particularly important in permafrost soils, considering that microbial community composition can strongly constrain permafrost biogeochemical processes.

Here we tested how a model species of microarthropod (the Collembola Folsomia candida) affected aerobic CO2 production of permafrost soil over a 25 d incubation. By using Collembola stock cultures grown on permafrost soil or on an arctic topsoil, we aimed to assess the potential for endo- and ectozoochory of soil bacteria, while cultures grown on gypsum and sprayed with soil suspensions would allow the observation of only ectozoochory.

The presence of Collembola introduced bacterial amplicon sequence variants (ASVs) absent in the no-Collembola control, regardless of their microbiome manipulation, when considering presence-absence metrics (unweighted UniFrac metrics), which resulted in increased species richness. However, these introduced ASVs did not induce changes in bacterial community composition as a whole (accounting for relative abundances, weighted UniFrac), which might only become detectable in the longer term.

CO2 production was increased by 25.85 % in the presence of Collembola, about half of which could be attributed to Collembola respiration based on respiration rates measured in the absence of soil. We argue that the rest of the CO2 being respired can be considered a priming effect of the presence of Collembola, i.e. a stimulation of permafrost CO2 production in the presence of active microarthropod decomposers. Overall, our findings underline the importance of biotic interactions in permafrost biogeochemical processes and the need to explore the additive or interactive effects of other soil food web groups of which permafrost soils are deprived.

Place, publisher, year, edition, pages
Copernicus Publications, 2022
National Category
Ecology
Identifiers
urn:nbn:se:umu:diva-200829 (URN)10.5194/bg-19-4089-2022 (DOI)000850336600001 ()2-s2.0-85140574670 (Scopus ID)
Available from: 2022-11-14 Created: 2022-11-14 Last updated: 2022-11-14Bibliographically approved
Krab, E. J., Lundin, E. J., Coulson, S. J., Dorrepaal, E. & Cooper, E. J. (2022). Experimentally increased snow depth affects high Arctic microarthropods inconsistently over two consecutive winters. Scientific Reports, 12(1), Article ID 18049.
Open this publication in new window or tab >>Experimentally increased snow depth affects high Arctic microarthropods inconsistently over two consecutive winters
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2022 (English)In: Scientific Reports, E-ISSN 2045-2322, Vol. 12, no 1, article id 18049Article in journal (Refereed) Published
Abstract [en]

Climate change induced alterations to winter conditions may affect decomposer organisms controlling the vast carbon stores in northern soils. Soil microarthropods are particularly abundant decomposers in Arctic ecosystems. We studied whether increased snow depth affected microarthropods, and if effects were consistent over two consecutive winters. We sampled Collembola and soil mites from a snow accumulation experiment at Svalbard in early summer and used soil microclimatic data to explore to which aspects of winter climate microarthropods are most sensitive. Community densities differed substantially between years and increased snow depth had inconsistent effects. Deeper snow hardly affected microarthropods in 2015, but decreased densities and altered relative abundances of microarthropods and Collembola species after a milder winter in 2016. Although increased snow depth increased soil temperatures by 3.2 °C throughout the snow cover periods, the best microclimatic predictors of microarthropod density changes were spring soil temperature and snowmelt day. Our study shows that extrapolation of observations of decomposer responses to altered winter climate conditions to future scenarios should be avoided when communities are only sampled on a single occasion, since effects of longer-term gradual changes in winter climate may be obscured by inter-annual weather variability and natural variability in population sizes.

Place, publisher, year, edition, pages
Nature Publishing Group, 2022
National Category
Ecology
Identifiers
urn:nbn:se:umu:diva-200864 (URN)10.1038/s41598-022-22591-5 (DOI)000876924900061 ()36302819 (PubMedID)2-s2.0-85140828603 (Scopus ID)
Available from: 2022-11-14 Created: 2022-11-14 Last updated: 2023-09-05Bibliographically approved
Monteux, S., Keuper, F., Fontaine, S., Gavazov, K., Hallin, S., Juhanson, J., . . . Dorrepaal, E. (2020). Carbon and nitrogen cycling in Yedoma permafrost controlled by microbial functional limitations. Nature Geoscience, 13(12), 794-+
Open this publication in new window or tab >>Carbon and nitrogen cycling in Yedoma permafrost controlled by microbial functional limitations
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2020 (English)In: Nature Geoscience, ISSN 1752-0894, E-ISSN 1752-0908, Vol. 13, no 12, p. 794-+Article in journal (Refereed) Published
Abstract [en]

Warming-induced microbial decomposition of organic matter in permafrost soils constitutes a climate-change feedback of uncertain magnitude. While physicochemical constraints on soil functioning are relatively well understood, the constraints attributable to microbial community composition remain unclear. Here we show that biogeochemical processes in permafrost can be impaired by missing functions in the microbial community-functional limitations-probably due to environmental filtering of the microbial community over millennia-long freezing. We inoculated Yedoma permafrost with a functionally diverse exogenous microbial community to test this mechanism by introducing potentially missing microbial functions. This initiated nitrification activity and increased CO2 production by 38% over 161 days. The changes in soil functioning were strongly associated with an altered microbial community composition, rather than with changes in soil chemistry or microbial biomass. The present permafrost microbial community composition thus constrains carbon and nitrogen biogeochemical processes, but microbial colonization, likely to occur upon permafrost thaw in situ, can alleviate such functional limitations. Accounting for functional limitations and their alleviation could strongly increase our estimate of the vulnerability of permafrost soil organic matter to decomposition and the resulting global climate feedback. Carbon dioxide emissions from permafrost thaw are substantially enhanced by relieving microbial functional limitations, according to incubation experiments on Yedoma permafrost.

Place, publisher, year, edition, pages
Nature Publishing Group, 2020
National Category
Climate Research
Identifiers
urn:nbn:se:umu:diva-178230 (URN)10.1038/s41561-020-00662-4 (DOI)000594838900006 ()2-s2.0-85096920794 (Scopus ID)
Available from: 2021-01-07 Created: 2021-01-07 Last updated: 2023-03-24Bibliographically approved
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ORCID iD: ORCID iD iconorcid.org/0000-0001-8262-0198

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