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Towards integration of population and comparative genomics in forest trees
Umeå universitet, Teknisk-naturvetenskapliga fakulteten, Institutionen för ekologi, miljö och geovetenskap. Umeå universitet, Teknisk-naturvetenskapliga fakulteten, Umeå Plant Science Centre (UPSC).
Umeå universitet, Teknisk-naturvetenskapliga fakulteten, Institutionen för fysiologisk botanik. Umeå universitet, Teknisk-naturvetenskapliga fakulteten, Umeå Plant Science Centre (UPSC). Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1432,As, Norway.ORCID-id: 0000-0001-6097-2539
Umeå universitet, Teknisk-naturvetenskapliga fakulteten, Institutionen för fysiologisk botanik. Umeå universitet, Teknisk-naturvetenskapliga fakulteten, Umeå Plant Science Centre (UPSC).ORCID-id: 0000-0001-6031-005X
2016 (engelsk)Inngår i: New Phytologist, ISSN 0028-646X, E-ISSN 1469-8137, Vol. 212, nr 2, s. 338-344Artikkel, forskningsoversikt (Fagfellevurdert) Published
Abstract [en]

The past decade saw the initiation of an ongoing revolution in sequencing technologies that is transforming all fields of biology. This has been driven by the advent and widespread availability of high-throughput, massively parallel short-read sequencing (MPS) platforms. These technologies have enabled previously unimaginable studies, including draft assemblies of the massive genomes of coniferous species and population-scale resequencing. Transcriptomics studies have likewise been transformed, with RNA-sequencing enabling studies in nonmodel organisms, the discovery of previously unannotated genes (novel transcripts), entirely new classes of RNAs and previously unknown regulatory mechanisms. Here we touch upon current developments in the areas of genome assembly, comparative regulomics and population genetics as they relate to studies of forest tree species.

sted, utgiver, år, opplag, sider
2016. Vol. 212, nr 2, s. 338-344
Emneord [en]
comparative genomics, comparative regulomics, expression network, expressolog, genome assembly, population genetics
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Identifikatorer
URN: urn:nbn:se:umu:diva-127619DOI: 10.1111/nph.14153ISI: 000383595700009PubMedID: 27575589OAI: oai:DiVA.org:umu-127619DiVA, id: diva2:1050805
Tilgjengelig fra: 2016-11-30 Laget: 2016-11-16 Sist oppdatert: 2018-06-09bibliografisk kontrollert

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Ingvarsson, Pär K.Hvidsten, Torgeir R.Street, Nathaniel R.

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