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Evolutionary convergence in experimental Pseudomonas populations
Umeå University, Faculty of Science and Technology, Department of Molecular Biology (Faculty of Science and Technology). Massey Univ Albany, New Zealand Inst Adv Study, Auckland, New Zealand; Massey Univ Albany, Allan Wilson Ctr Mol Ecol & Evolut, Auckland, New Zealand. (Peter Lind)ORCID iD: 0000-0003-1510-8324
New Zealand Institute for Advanced Study and Allan Wilson Centre for Molecular Ecology and Evolution, Massey University.
New Zealand Institute for Advanced Study and Allan Wilson Centre for Molecular Ecology and Evolution, Massey University; Department of Microbial Population Biology, Max Planck Institute for Evolutionary Biology; Ecole Supérieure de Physique et de Chimie Industrielles de la Ville de Paris (ESPCI Paris-Tech), PSL Research University.
2017 (English)In: The ISME Journal, ISSN 1751-7362, E-ISSN 1751-7370, Vol. 11, no 3, p. 589-600Article in journal (Refereed) Published
Abstract [en]

Model microbial systems provide opportunity to understand the genetic bases of ecological traits, their evolution, regulation and fitness contributions. Experimental populations of Pseudomonas fluorescens rapidly diverge in spatially structured microcosms producing a range of surface-colonising forms. Despite divergent molecular routes, wrinkly spreader (WS) niche specialist types overproduce a cellulosic polymer allowing mat formation at the air–liquid interface and access to oxygen. Given the range of ways by which cells can form mats, such phenotypic parallelism is unexpected. We deleted the cellulose-encoding genes from the ancestral genotype and asked whether this mutant could converge on an alternate phenotypic solution. Two new traits were discovered. The first involved an exopolysaccharide encoded by pgaABCD that functions as cell–cell glue similar to cellulose. The second involved an activator of an amidase (nlpD) that when defective causes cell chaining. Both types form mats, but were less fit in competition with cellulose-based WS types. Surprisingly, diguanylate cyclases linked to cellulose overexpression underpinned evolution of poly-beta-1,6-N-acetyl-d-glucosamine (PGA)-based mats. This prompted genetic analyses of the relationships between the diguanylate cyclases WspR, AwsR and MwsR, and both cellulose and PGA. Our results suggest that c-di-GMP regulatory networks may have been shaped by evolution to accommodate loss and gain of exopolysaccharide modules facilitating adaptation to new environments.

Place, publisher, year, edition, pages
2017. Vol. 11, no 3, p. 589-600
Keywords [en]
Pseudomonas fluorescens, experimental evolution, convergent evolution, cellulose, pgaABCD, nlpD
National Category
Evolutionary Biology Genetics Microbiology Ecology
Research subject
evolutionary genetics; Microbiology
Identifiers
URN: urn:nbn:se:umu:diva-128802DOI: 10.1038/ismej.2016.157ISI: 000394542000001OAI: oai:DiVA.org:umu-128802DiVA, id: diva2:1056492
Available from: 2016-12-14 Created: 2016-12-14 Last updated: 2018-06-09Bibliographically approved

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Lind, Peter A

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