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Dataset of the proteome of purified outer membrane vesicles from the human pathogen Aggregatibacter actinomycetemcomintans
Umeå University, Faculty of Science and Technology, Department of Chemistry.
Umeå University, Faculty of Medicine, Department of Odontology, Oral Microbiology.
2017 (English)In: Data in Brief, ISSN 2352-3409, Vol. 10, 426-431 p.Article in journal (Refereed) Published
Abstract [en]

Abstract The Gram-negative bacterium Aggregatibacter actinomycetemcomitans is an oral and systemic pathogen, which is linked to aggressive forms of periodontitis and can be associated with endocarditis. The outer membrane vesicles (OMVs) of this species contain effector proteins such as cytolethal distending toxin (CDT) and leukotoxin (LtxA), which they can deliver into human host cells. The OMVs can also activate innate immunity through NOD1- and NOD2-active pathogen-associated molecular patterns. This dataset provides a proteome of highly purified OMVs from A. actinomycetemcomitans serotype e strain 173. The experimental data do not only include the raw data of the LC-MS/MS analysis of four independent preparations of purified OMVs but also the mass lists of the processed data and the Mascot.dat files from the database searches. In total 501 proteins are identified, of which 151 are detected in at least three of four independent preparations. In addition, this dataset contains the COG definitions and the predicted subcellular locations (PSORTb 3.0) for the entire genome of A. actinomycetemcomitans serotype e strain SC1083, which is used for the evaluation of the LC-MS/MS data. These data are deposited in ProteomeXchange in the public dataset PXD002509. In addition, a scientific interpretation of this dataset by Kieselbach et al. (2015) [2] is available at http://dx.doi.org/10.1371/journal.pone.0138591.

Place, publisher, year, edition, pages
Elsevier, 2017. Vol. 10, 426-431 p.
Keyword [en]
Micobiology, Odontology, Periodontitis, Outer membrane vesicle, Proteomics
National Category
Chemical Sciences
Identifiers
URN: urn:nbn:se:umu:diva-128946DOI: 10.1016/j.dib.2016.12.015PubMedID: 28050585OAI: oai:DiVA.org:umu-128946DiVA: diva2:1058089
Available from: 2016-12-20 Created: 2016-12-20 Last updated: 2017-01-19Bibliographically approved

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CiteExportLink to record
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Citation style
  • apa
  • harvard1
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