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Characterization of entamoeba histolytica alpha-actinin
Umeå University, Faculty of Science and Technology, Department of Chemistry.
Umeå University, Faculty of Science and Technology, Department of Chemistry.
2006 (English)In: Molecular and biochemical parasitology (Print), ISSN 0166-6851, E-ISSN 1872-9428, Vol. 145, no 1, 11-17 p.Article in journal (Refereed) Published
Abstract [en]

We have cloned, expressed and characterized a alpha-actinin-like protein of Entamoeba histolytica. Analysis of the primary structure reveals that the essential domains of the alpha-actinin protein family are conserved: an N-terminus actin-binding domain, a C-terminus calcium-binding domain and a central helical rod domain. However, the rod domain of this Entamoeba protein is considerably shorter than the rod domain in alpha-actinins of higher organisms. The cloned Entamoeba 63 kDa protein is recognized by conventional alpha-actinin antibodies as well as binds and cross-links filamentous actin and calcium ions in the same manner as alpha-actinins. Despite the shorter rod domain this protein has conserved the most important functions of alpha-actinins. Therefore, it is suggested that this 63 kDa protein is an atypical and ancestral alpha-actinin.

Place, publisher, year, edition, pages
Amsterdam: Elsevier/North-Holland , 2006. Vol. 145, no 1, 11-17 p.
Keyword [en]
Actinin/chemistry/genetics/metabolism, Actins/metabolism, Animals, Calcium/metabolism, Circular Dichroism, Cloning; Molecular, Entamoeba histolytica/*metabolism/ultrastructure, Microscopy; Electron; Transmission, Sequence Analysis; DNA, Spectrometry; Mass; Matrix-Assisted Laser Desorption-Ionization/methods
Identifiers
URN: urn:nbn:se:umu:diva-12341DOI: doi:10.1016/j.molbiopara.2005.09.003PubMedID: 16219372OAI: oai:DiVA.org:umu-12341DiVA: diva2:152012
Available from: 2007-05-07 Created: 2007-05-07 Last updated: 2017-12-14Bibliographically approved
In thesis
1. Molecular characterization and evolution of alpha-actinin: from protozoa to vertebrates
Open this publication in new window or tab >>Molecular characterization and evolution of alpha-actinin: from protozoa to vertebrates
2006 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

alpha-actinin is a ubiquitous protein found in most eukaryotic organisms. The ability to form dimers allows alpha-actinin to cross-link actin in different structures. In muscle cells alpha-actinin is found at the Z-disk of sarcomeres. In non-muscle cells alpha-actinin is found in zonula adherens or focal adhesion sites where it can bind actin to the plasma membrane.

alpha-actinin is the shortest member of the spectrin superfamily of proteins which also includes spectrin, dystrophin and utrophin. Several hypotheses suggest that alpha-actinin is the ancestor of this superfamily.

The structure of alpha-actinin in higher organisms has been well characterized consisting of three main domains: an N-terminal actin-binding domain with two calponin homology domains, a central rod domain with four spectrin repeats and a C-terminal calcium-binding domain. Data mining of genomes from diverse organisms has made possible the discovery of new and atypical alpha-actinin isoforms that have not been characterized yet.

Invertebrates contain a single alpha-actinin isoform, whereas most of the vertebrates contain four. These four isoforms can be broadly classified in two groups, muscle isoforms and non-muscle isoforms. Muscle isoforms bind actin in a calcium independent manner whereas non-muscle isoforms bind actin in a calcium-dependent manner.

Some of the protozoa and fungi isoforms are atypical in that they contain fewer spectrin repeats in the rod domain. We have purified and characterized two ancestral alpha-actinins from the parasite Entamoeba histolytica. Our results show that despite the shorter rod domain they conserve the most important functions of modern alpha-actinin such as actin-bundling formation and calcium-binding regulation. Therefore it is suggested that they are genuine alpha-actinins.

The phylogenetic tree of alpha-actinin shows that the four different alpha-actinin isoforms appeared after the vertebrate-invertebrate split as a result of two rounds of genome duplication. The atypical alpha-actinin isoforms are placed as the most divergent isoforms suggesting that they are ancestral isoforms. We also propose that the most ancestral alpha-actinin contained a single repeat in its rod domain. After a first intragene duplication alpha-actinin with two spectrin repeats were created and a second intragene duplication gave rise to modern alpha-actinins with four spectrin repeats.

Place, publisher, year, edition, pages
Umeå: Kemi, 2006. 52 p.
Keyword
alpha-actinin, evolution, spectrin repeat, intragene duplication, phylogenetic tree, spectrin superfamily
National Category
Biochemistry and Molecular Biology
Identifiers
urn:nbn:se:umu:diva-931 (URN)91-7264-204-1 (ISBN)
Public defence
2006-12-09, KB3A9, KBC, Umeå University SE-901 87, Umeå Sweden, 10:00
Opponent
Supervisors
Available from: 2006-11-16 Created: 2006-11-16 Last updated: 2011-04-26Bibliographically approved

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Publisher's full textPubMedhttp://dx.doi.org/10.1016/j.molbiopara.2005.09.003

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