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Distribution of mutation rates challenges evolutionary predictability
Umeå University, Faculty of Science and Technology, Department of Molecular Biology (Faculty of Science and Technology).ORCID iD: 0000-0002-5277-7861
Umeå University, Faculty of Medicine, Umeå Centre for Microbial Research (UCMR). Umeå University, Faculty of Science and Technology, Department of Molecular Biology (Faculty of Science and Technology).ORCID iD: 0000-0003-1510-8324
2023 (English)In: Microbiology, ISSN 1350-0872, E-ISSN 1465-2080, Vol. 169, no 5, article id 001323Article in journal (Refereed) Published
Abstract [en]

Natural selection is commonly assumed to act on extensive standing genetic variation. Yet, accumulating evidence highlights the role of mutational processes creating this genetic variation: to become evolutionarily successful, adaptive mutants must not only reach fixation, but also emerge in the first place, i.e. have a high enough mutation rate. Here, we use numerical simulations to investigate how mutational biases impact our ability to observe rare mutational pathways in the laboratory and to predict outcomes in experimental evolution. We show that unevenness in the rates at which mutational pathways produce adaptive mutants means that most experimental studies lack power to directly observe the full range of adaptive mutations. Modelling mutation rates as a distribution, we show that a substantially larger target size ensures that a pathway mutates more commonly. Therefore, we predict that commonly mutated pathways are conserved between closely related species, but not rarely mutated pathways. This approach formalizes our proposal that most mutations have a lower mutation rate than the average mutation rate measured experimentally. We suggest that the extent of genetic variation is overestimated when based on the average mutation rate.

Place, publisher, year, edition, pages
Microbiology Society, 2023. Vol. 169, no 5, article id 001323
Keywords [en]
coupon collector's problem, distribution of mutation rates, mutation bias, mutation rate, predicting evolution, Pseudomonas
National Category
Microbiology
Identifiers
URN: urn:nbn:se:umu:diva-208862DOI: 10.1099/mic.0.001323ISI: 000991098900002PubMedID: 37134005Scopus ID: 2-s2.0-85159771143OAI: oai:DiVA.org:umu-208862DiVA, id: diva2:1761543
Funder
Swedish Research Council, 2019-04859Carl Tryggers foundation , 19:204Åke Wiberg Foundation, M18-0142Available from: 2023-06-01 Created: 2023-06-01 Last updated: 2023-08-25Bibliographically approved

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Sun, T. AnthonyLind, Peter A.

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Department of Molecular Biology (Faculty of Science and Technology)Umeå Centre for Microbial Research (UCMR)
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