Umeå University's logo

This master’s thesis project investigates the utilization of a low-cost hyperspectral (HS) imaging rig to identify and classify drought stress in pine plants. Drought stress is a widespread environmental challenge affecting global forestry, requiring more resources as the industry grows and global warming rises. This provokes a need for affordable, and efficient monitoring methods. HS imaging, with its ability to capture a wide range of spectral information, offers promising methods for quick and precise measurements of plant stress. The project methodology is comprised of redesigning an existing HS imaging rig, with the camera employing push-broom technology, to yield precise and consistent HS images. This involved exploring the camera’s spectral range, designing components to ensure consistent artificial lighting using blackbody radiation sources, and calibrating the HS camera for focal depth and aberrations like smile and keystone. Two experiments were conducted to obtain the data for pine stress detection, first for two binary categories: Control, and 100% Drought, and later introducing a third semi-drought category in the second experiment. The data analysis encompassed preprocessing the HS images to correct the lighting intensity distributions and normalization of pixel values. Accompanied by filtering, resampling spectral data, and feature extraction facilitating consistent drought identification, and data management. To identify stress patterns in pine plants and temporal decay rates, methods such as spectral reflectance analysis, various vegetation indices (VI), and statistical learning techniques like discriminant analysis and logistic regression were evaluated for distinguishing between stressed and healthy plants. The results demonstrate the accuracy of the HS imaging rig in measuring spectral reflectances from plants, capturing changes between 550 − 670 nm in the visible spectrum and 750 − 890 nm in the near-infrared (NIR) spectrum due to increasing stress affecting chlorophyll levels. Both well-established VIs and empirically designed indices indicate reliable early detection. Comparing multiple VIs to statistical learning models shows similar performances in binary classification tasks. Feature selection methods using correlation matrices, and L1 penalty for logistic regression support stress effects visible in the data, paving the way for cost-effective strategies in sustainable forestry management.