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Drug-target Mendelian randomization analysis supports lowering plasma ANGPTL3, ANGPTL4, and APOC3 levels as strategies for reducing cardiovascular disease risk
Umeå University, Faculty of Medicine, Department of Public Health and Clinical Medicine. Lipigon Pharmaceuticals Ab, Tvistevägen 48C, Umeå, Sweden.ORCID iD: 0000-0002-5695-2276
Department of Human Genetics, Amsterdam University Medical Center, Meibergdreef 9, Amsterdam, Netherlands.
Umeå University, Faculty of Medicine, Department of Public Health and Clinical Medicine.ORCID iD: 0000-0002-8057-1684
Umeå University, Faculty of Medicine, Department of Medical Biosciences, Physiological chemistry. Lipigon Pharmaceuticals Ab, Tvistevägen 48C, Umeå, Sweden.
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2024 (English)In: European Heart Journal Open, E-ISSN 2752-4191, Vol. 4, no 3, article id oeae035Article in journal (Refereed) Published
Abstract [en]

Aims: APOC3, ANGPTL3, and ANGPTL4 are circulating proteins that are actively pursued as pharmacological targets to treat dyslipidaemia and reduce the risk of atherosclerotic cardiovascular disease. Here, we used human genetic data to compare the predicted therapeutic and adverse effects of APOC3, ANGPTL3, and ANGPTL4 inactivation.

Methods and results: We conducted drug-target Mendelian randomization analyses using variants in proximity to the genes associated with circulating protein levels to compare APOC3, ANGPTL3, and ANGPTL4 as drug targets. We obtained exposure and outcome data from large-scale genome-wide association studies and used generalized least squares to correct for linkage disequilibrium-related correlation. We evaluated five primary cardiometabolic endpoints and screened for potential side effects across 694 disease-related endpoints, 43 clinical laboratory tests, and 11 internal organ MRI measurements. Genetically lowering circulating ANGPTL4 levels reduced the odds of coronary artery disease (CAD) [odds ratio, 0.57 per s.d. protein (95% CI 0.47-0.70)] and Type 2 diabetes (T2D) [odds ratio, 0.73 per s.d. protein (95% CI 0.57-0.94)]. Genetically lowering circulating APOC3 levels also reduced the odds of CAD [odds ratio, 0.90 per s.d. protein (95% CI 0.82-0.99)]. Genetically lowered ANGPTL3 levels via common variants were not associated with CAD. However, meta-analysis of protein-truncating variants revealed that ANGPTL3 inactivation protected against CAD (odds ratio, 0.71 per allele [95%CI, 0.58-0.85]). Analysis of lowered ANGPTL3, ANGPTL4, and APOC3 levels did not identify important safety concerns.

Conclusion: Human genetic evidence suggests that therapies aimed at reducing circulating levels of ANGPTL3, ANGPTL4, and APOC3 reduce the risk of CAD. ANGPTL4 lowering may also reduce the risk of T2D.

Place, publisher, year, edition, pages
Oxford University Press, 2024. Vol. 4, no 3, article id oeae035
Keywords [en]
Angiopoietin-like protein 3, Angiopoietin-like protein 4, Apolipoprotein C-III
National Category
Medical Biotechnology (with a focus on Cell Biology (including Stem Cell Biology), Molecular Biology, Microbiology, Biochemistry or Biopharmacy)
Identifiers
URN: urn:nbn:se:umu:diva-233737DOI: 10.1093/ehjopen/oeae035PubMedID: 38895109Scopus ID: 2-s2.0-85196152871OAI: oai:DiVA.org:umu-233737DiVA, id: diva2:1925428
Funder
Norrländska Hjärtfonden, 371130802Available from: 2025-01-08 Created: 2025-01-08 Last updated: 2025-05-01Bibliographically approved
In thesis
1. Decoding dyslipidemia: human genetic studies of drug targets in atherosclerotic vascular disease
Open this publication in new window or tab >>Decoding dyslipidemia: human genetic studies of drug targets in atherosclerotic vascular disease
2025 (English)Doctoral thesis, comprehensive summary (Other academic)
Alternative title[sv]
Genjakt på målprotein : studier av läkemedelskandidater vid blodfettsrubbningar.
Abstract [en]

Despite significant advancements in prevention and treatment, atherosclerotic cardiovascular disease remains a leading cause of mortality and morbidity. Atherosclerosis develops from the accumulation of lipoprotein debris in arterial walls, resulting in plaque buildup that causes arterial narrowing, thickening, or softening and may ultimately trigger thrombosis. Current therapies effectively lower low-density lipoprotein (LDL) levels while insufficiently addressing other atherogenic lipids like very-low-density lipoproteins (VLDL) and chylomicron remnants. Furthermore, the optimal timing for initiating lipid-lowering interventions is debated. Conventional cardiovascular prevention strategies, which base treatment decisions on ten-year risk calculations, may underestimate the cumulative impact of lifelong lipid exposure.

This thesis uses human genetics to explore the lifelong impact of inhibiting specific lipid-lowering drug candidate targets. We examine two key approaches in lipoprotein lowering: activating the rate-limiting enzyme in intravascular triglyceride hydrolysis, lipoprotein lipase (LPL), focusing on its activation through inhibiting the angiopoietin-like (ANGPTL) protein family of regulators; and the reverse cholesterol transport system, reevaluating cholesteryl ester transfer protein (CETP) as a drug target.

Through genetic association studies, Mendelian randomization, genetic mimicry analyses, and meta-analyses of clinical trials, we demonstrate that targeting these proteins may offer protection against atherosclerotic cardiovascular disease. Our findings support the ongoing clinical development of ANGPTL3, ANGPTL4, and CETP inhibitors for cardiovascular prevention while emphasizing the value of human genetics in drug discovery. Lastly, this work improves our understanding of lipid management throughout the lifespan and highlights the potential benefits of early intervention.   

Place, publisher, year, edition, pages
Umeå: Umeå University, 2025. p. 142
Series
Umeå University medical dissertations, ISSN 0346-6612 ; 2359
Keywords
Dyslipidemias, Cardiovascular disease, Angiopoietin-like proteins, Lipoprotein lipase, Atherosclerosis, Genetic epidemiology
National Category
Cardiology and Cardiovascular Disease
Identifiers
urn:nbn:se:umu:diva-238322 (URN)978-91-8070-703-9 (ISBN)978-91-8070-702-2 (ISBN)
Public defence
2025-05-23, Hörsal B våning 9, Målpunkt B, Norrlands Universitetssjukhus, Umeå, 09:00 (Swedish)
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Available from: 2025-05-02 Created: 2025-05-01 Last updated: 2025-05-05Bibliographically approved

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Landfors, FredrikChorell, ElinNilsson, Stefan K.

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