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Characterisation of heritable TP53-related cancer syndrome in Sweden: a nationwide study of genotype-phenotype correlations in 90 families
Department of Oncology-Pathology, Karolinska Institutet, BioClinicum, Stockholm, Sweden; Cancer Theme, Karolinska University Hospital, Stockholm, Sweden.
Department of Oncology-Pathology, Karolinska Institutet, BioClinicum, Stockholm, Sweden; Department of Breast Surgery, Obstetrics and Gynecology Hospital of Fudan University, Shanghai, China.
Department of Oncology-Pathology, Karolinska Institutet, BioClinicum, Stockholm, Sweden.
Department of Clinical Genetics, Genetics and Pathology, Uppsala University Hospital, Uppsala, Sweden; Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden.
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2025 (English)In: European Journal of Human Genetics, ISSN 1018-4813, E-ISSN 1476-5438, article id 738Article in journal (Refereed) Epub ahead of print
Abstract [en]

We aimed to describe the clinical characteristics of families with heritable TP53-related cancer (hTP53rc) syndrome in Sweden with class 4 and 5 germline TP53 variants (gTP53), and to evaluate the genotype-phenotype correlation. These results were also used to evaluate our previously published phenotype prediction model based on TP53 missense variants and their impact on protein conformation. 90 families with hTP53rc were initially identified in Sweden. After variant reclassification using the TP53-specific ACMG criteria, 83 families remained (176 carriers) to harbour a pathogenic (class 5) or likely pathogenic (class 4) variant in TP53. Of these, 112 carriers (64%) had a previous history of cancer, and 35 (31%) had developed more than one primary tumour. 16% of the families met the stricter criteria for Classic Li-Fraumeni syndrome, 45% the updated Chompret criteria, 35% for hereditary breast cancer (HBC), and the remaining 5% were classified as “Others”. We identified 42 different gTP53 variants of which 22 were missense. The most frequently observed variant was the missense c.542 G > A, p.R181H identified in 14/29 (48%) of HBC families. Fifteen of the 20 informative missense variants (75%) were phenotypically predicted correctly using our previously published in silico prediction model. The TP53 p.R181H was identified as a common Swedish variant predominantly associated with an HBC phenotype. Apart from this variant, there were no significant genotype-phenotype correlations. Therefore, due to phenotypic overlap it is still too early to stratify surveillance programme for different TP53-carriers.

Place, publisher, year, edition, pages
Springer Nature, 2025. article id 738
National Category
Medical Genetics and Genomics Cancer and Oncology
Identifiers
URN: urn:nbn:se:umu:diva-233985DOI: 10.1038/s41431-024-01753-1ISI: 001390296600001PubMedID: 39757328Scopus ID: 2-s2.0-85214091294OAI: oai:DiVA.org:umu-233985DiVA, id: diva2:1927650
Funder
The Cancer Research Funds of Radiumhemmet, 201052The Cancer Research Funds of Radiumhemmet, 231063The Cancer Research Funds of Radiumhemmet, 009614The Breast Cancer FoundationSwedish Cancer Society, 22 2451 FkRegion Stockholm, FoUI-973659Swedish Childhood Cancer Foundation, TJ2021-0125Swedish Childhood Cancer Foundation, TJ2022-0011Available from: 2025-01-15 Created: 2025-01-15 Last updated: 2025-01-15

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Rosén, Anna

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