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The bHLH62 transcription factor is involved in the PIRIN2-dependent regulation of lignification in the xylem of Arabidopsis thaliana
Umeå University, Faculty of Science and Technology, Department of Plant Physiology.
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(English)Manuscript (preprint) (Other academic)
National Category
Botany
Identifiers
URN: urn:nbn:se:umu:diva-116698OAI: oai:DiVA.org:umu-116698DiVA: diva2:902162
Available from: 2016-02-10 Created: 2016-02-10 Last updated: 2016-02-11Bibliographically approved
In thesis
1. Xylem cells cooperate in the control of lignification and cell death during plant vascular development
Open this publication in new window or tab >>Xylem cells cooperate in the control of lignification and cell death during plant vascular development
2016 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

The evolutionary success of land plants was fostered by the acquisition of the xylem vascular tissue which conducts water and minerals upwards from the roots. The xylem tissue of flowering plants is composed of three main types of cells: the sap-conducting tracheary elements (TE), the fibres which provide mechanical support and the parenchyma cells which provide metabolic support to the tissue. Both the TEs and the fibres deposit thick polysaccharidic secondary cell walls (SCWs), reinforced by a rigid phenolic polymer called lignin. The cell walls of TEs form efficient water conducting hollow tubes after the TEs have undergone programmed cell death (PCD) and complete protoplast degradation as a part of their differentiation. The work presented in this thesis studied the regulation of TE PCD by characterizing the function of the candidate PCD regulator METACASPASE 9 (MC9) in Arabidopsis thaliana xylogenic cell suspensions. These cell suspensions can be externally induced to differentiate into a mix of TEs and parenchymatic non-TE cells, thus representing an ideal system to study the cellular processes of TE PCD. In this system, TEs with reduced expression of MC9 were shown to have increased levels of autophagy and to trigger the ectopic death of the non-TE cells. The viability of the non-TE cells could be restored by down-regulating autophagy specifically in the TEs with reduced MC9 expression. Therefore, this work showed that MC9 must tightly regulate the level of autophagy during TE PCD in order to prevent the TEs from becoming harmful to the non-TEs. Hence, this work demonstrated the existence of a cellular cooperation between the TEs and the surrounding parenchymatic cells during TE PCD. The potential cooperation between the TEs and the neighbouring parenchyma during the biosynthesis of lignin was also investigated. The cupin domain containing protein PIRIN2 was found to regulate TE lignification in a non-cell autonomous manner in Arabidopsis thaliana. More precisely, PIRIN2 was shown to function as an antagonist of positive transcriptional regulators of lignin biosynthetic genes in xylem parenchyma cells. Part of the transcriptional regulation by PIRIN2 involves chromatin modifications, which represent a new type of regulation of lignin biosynthesis. Because xylem constitutes the wood in tree species, this newly discovered regulation of non-cell autonomous lignification represents a potential target to modify lignin biosynthesis in order to overcome the recalcitrance of the woody biomass for the production of biofuels.

Place, publisher, year, edition, pages
Umeå University, 2016. 76 p.
Keyword
Xylem, Arabidopsis, programmed cell death, tracheary element, xylem vessel, autophagy, metacaspase, lignin, secondary cell wall, chromatin, gene expression
National Category
Botany
Identifiers
urn:nbn:se:umu:diva-115787 (URN)978-91-7601-400-4 (ISBN)
Public defence
2016-03-04, KB3A9, KBC building, Umeå University, Umeå, 13:00 (English)
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Supervisors
Available from: 2016-02-12 Created: 2016-02-04 Last updated: 2016-02-11Bibliographically approved

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Escamez, Sacha
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