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1. Most stream networks are characterised by spatial and temporal variability in the physico-chemical conditions that regulate microbial processing of particulate organic matter. How these patterns control the turnover of particulate organic matter via altered activity of leaf-associated microbes has rarely been studied in high-latitude landscapes, particularly throughout long (i.e., up to 6 months) ice- and snow-covered periods.
2. We investigated development of fungal biomass, enzyme activity, microbial respiration, and birch leaf litter decomposition from autumn to early summer in 11 nested streams in a boreal catchment that encompass a gradient in wetland (mire) cover.
3. We observed relatively low variability in decomposition rates across the network, despite differences in key physical and chemical variables (e.g. temperature, pH, and dissolved organic carbon [DOC] concentrations) over time and space.
4. Microbial enzymatic activity and respiration were positively related to leaf litter decomposition rates during early stages of decomposition (i.e., up to c. 30% loss of initial ash-free dry mass). Thereafter, variation in microbial activity and respiration was decoupled from leaf litter mass loss, as enzymatic activity and respiration instead became positively related to DOC concentrations and upstream mire (wetland) cover among streams.
5. Our results suggest that leaf-associated microbes increase their reliance on external sources of energy over time. This switch in resource use was more evident in streams with higher DOC concentration, which in boreal landscapes is largely determined by mire cover. Hence, variation in DOC concentration, linked to landscape configuration, or from intensified land use and climate change, could affect how different carbon sources are used by stream microbial communities, with consequences for overall carbon cycling in boreal headwaters.

Research on nutrient controls of planktonic productivity tends to focus on a few standard fractions of inorganic or total nitrogen (N) and phosphorus (P). However, there is a wide range in the degree to which land-derived dissolved organic nutrients can be assimilated by biota. Thus, in systems where such fractions form a majority of the macronutrient resource pool, including many boreal inland waters and estuaries, our understanding of bacterio-and phytoplankton production dynamics remains limited. To adequately predict aquatic productivity in a changing environment, improved standard methods are needed for determining the sizes of active (bioavailable) pools of N, P and organic carbon (C). A synthesis of current knowledge suggests that variation in the C:N:P stoichiometry of bioavailable resources is associated with diverse processes that differentially influence the individual elements across space and time. Due to a generally increasing organic nutrient bioavailability from C to N to P, we hypothesize that the C:N and N:P of bulk resources often vastly overestimates the corresponding ratios of bioavailable resources. It is further proposed that basal planktonic production is regulated by variation in the source, magnitude and timing of terrestrial runoff, through processes that have so far been poorly described.

Aquatic microbial responses to changes in the amount and composition of dissolved organic carbon (DOC) are of fundamental ecological and biogeochemical importance. Parallel factor (PARAFAC) analysis of excitation–emission fluorescence spectra is a common tool to characterize DOC, yet its ability to predict bacterial production (BP), bacterial respiration (BR), and bacterial growth efficiency (BGE) vary widely, potentially because inorganic nutrient limitation decouples microbial processes from their dependence on DOC composition. We used 28-d bioassays with water from 19 lakes, streams, and rivers in northern Sweden to test how much the links between bacterial metabolism and fluorescence PARAFAC components depend on experimental additions of inorganic nutrients. We found a significant interaction effect between nutrient addition and fluorescence on carbon-specific BP, and weak evidence for influence on BGE by the same interaction (p = 0.1), but no corresponding interaction effect on BR. A practical implication of this interaction was that fluorescence components could explain more than twice as much of the variability in carbon-specific BP (R² = 0.90) and BGE (R² = 0.70) after nitrogen and phosphorus addition, compared with control incubations. Our results suggest that an increased supply of labile DOC relative to ambient phosphorus and nitrogen induces gradually larger degrees of nutrient limitation of BP, which in turn decouple BP and BGE from fluorescence signals. Thus, while fluorescence does contain precise information about the degree to which DOC can support microbial processes, this information may be hidden in field studies due to nutrient limitation of bacterial metabolism.

Catchment science has long held that the chemistry of small streams reflects the landscapes they drain. However, understanding the contribution of different landscape units to stream chemistry remains a challenge which frequently limits our understanding of export dynamics. For limiting nutrients such as nitrogen (N), an implicit assumption is that the most spatially extensive landscape units (e.g., uplands) act as the primary sources to surface waters, while near-stream zones function more often as sinks. These assumptions, based largely on studies in high-gradient systems or in regions with elevated inputs of anthropogenic N, may not apply to low-gradient, nutrient-poor, and peat-rich catchments characteristic of many northern ecosystems. We quantified patterns of N mobilization along a hillslope transect in a northern boreal catchment to assess the extent to which organic matter-rich riparian soils regulate the flux of N to streams. Contrary to the prevailing view of riparian functioning, we found that near-stream, organic soils supported concentrations and fluxes of ammonium (NH₄⁺) and dissolved organic nitrogen that were much higher than the contributing upslope forest soils. These results suggest that stream N chemistry is connected to N mobilization and mineralization within the riparian zone rather than the wider landscape. Results further suggest that water table fluctuation in near-surface riparian soils may promote elevated rates of net N mineralization in these landscapes.

Nutrient limitation of the biofilm is fundamental to stream ecosystem processes, as microbial activity shapes the biological availability and biogeochemical cycling of carbon and nutrients. We used nutrient-diffusing substrata (NDS) to investigate heterotrophic nutrient limitation of microbial respiration (MR) across 20 streams draining boreal landscapes in northern Sweden. We also explored variation in microbial biomass and community structure of biofilms that developed on NDS using phospholipid fatty acid (PLFA) biomarkers. Limitation was determined as a significant response of MR and biomass production on cellulose surfaces to enrichment with nitrogen (N), phosphorus (P) or N+P, relative to controls. Microbial respiration was N-limited, with an average 3.3-fold increase on N-amended NDS. Nitrogen limitation decreased, and control rates of MR increased, with greater background concentrations of inorganic N across the sites. In contrast to MR, microbial biomass was primarily N-limited but was greatest for the N+P NDS. Accordingly, differences in respiratory versus biomass responses to nutrient addition resulted in significantly greater biomass-specific MR on N-amended NDS compared to all other treatments. In addition, PLFA biomarkers indicated distinct microbial communities on N and N+P NDS compared to controls and/or P NDS. Greater MR and biomass, and the development of distinct microbial communities, when supplied with inorganic N suggest that factors which alter aquatic N loading during autumn may have important implications for ecosystem processes and the biogeochemistry of boreal streams and rivers. Our findings add to a growing body of evidence that the productivity of Fennoscandian boreal landscapes is constrained by N availability.

Boreal forests account for 30% of the world's total forest cover and in many places are subject to intensive forest management, which often involves complete removal of overstory vegetation by clear-cutting. However, we still do not fully understand how forest management affects aquatic ecosystems in these landscapes. Here we asked how forest management-induced changes in environmental conditions, such as incident light and nutrient availability, affect benthic algal growth and nutrient limitation in boreal headwater streams of northern Sweden. We answered this question using a combination of correlative and experimental approaches across a range of forested streams spanning a gradient of site (e.g. canopy openness and water chemistry) and catchment-level (e.g. age of forest regrowth) parameters, with variation among the study streams influenced by different forest management histories and underlying natural variation. We found that benthic algal growth in these forested streams was largely driven by local interactions between dissolved inorganic nitrogen (N) availability and incident light reaching benthic surfaces. Greater water temperature and shallower depths were also associated with greater algal growth. Although high dissolved organic carbon (DOC) concentrations often play a role in reducing light availability to autotrophs in boreal aquatic systems, it was not an important predictor of algal growth in small forested streams despite a large DOC concentration gradient (5 – 32 mg/L). Results from experimental nutrient additions supported the role of N as a key limiting nutrient, but also revealed both spatial and seasonal factors that modulate the effects of altered nutrient availability. Overall, our results suggest that differences in how light regimes and nutrient loading respond to forest management generate small-scale variation in the controls over stream primary productivity, which likely shift in relative importance at the time scale of a forest rotation (60 to 100 years).

Unraveling the potentially shifting controls over microbial activity among habitats and across seasonal transitions is critical for understanding how freshwater ecosystems influence broader elemental cycles, and how these systems may respond to global changes. We used nutrient-diffusing substrates to investigate seasonal patterns and constraints on microbial activity of biofilms in streams draining distinct landscape features of the boreal biome (forests, mires, and lakes). Microbial respiration (MR) largely mirrored spatial and temporal variation in water temperature. However, limitation by labile carbon (C) was a constraint to microbial activity during ice-covered periods, when MR of control nutrient-diffusing substrates fell below rates predicted from stream temperature alone. Variation in C limitation among the study streams was reflective of putative organic C availability, with C limitation of biofilms weakest in the dissolved organic C (DOC)-rich, mire-outlet stream and greatest in the relatively DOC-poor, forest stream. Incidences of nutrient limitation were only observed during warmer months. Our study illustrates how variation in processes mediated by heterotrophic biofilms and seasonal shifts in resource limitation can emerge in a stream network draining a heterogeneous landscape. In addition, our results show that, for a large portion of the year, heterotrophic processes in boreal streams can be strongly limited by the availability of labile C, despite high DOC concentrations. Metabolic constraints to dissolved organic matter processing at near-freezing temperatures, coupled with hydrological controls over the delivery of more labile organic resources to streams (e.g., soil freezing and flooding), have potentially strong influences on the productivity of boreal streams.

Arid and semi-arid ecosystems (aridlands) cover a third of Earth's terrestrial surface and contain organisms that are sensitive to low level atmospheric pollutants. Atmospheric nitrogen (N) inputs to aridlands are likely to cause changes in plant community composition, fire frequency, and carbon cycling and storage. However, few studies have documented long-term rates of atmospheric N inputs in aridlands because dry deposition is technically difficult to quantify, and extensive sampling is needed to capture fluxes with spatially and temporally heterogeneous rainfall patterns. Here, we quantified long-term spatial and temporal patterns of inorganic N deposition in protected aridland ecosystems across an extensive urban-rural gradient using multiple sampling methods. We compared long-term rates of N deposition from ion-exchange resin (IER) collectors (bulk and throughfall, 2006-2015), wet-dry bucket collectors (2006-2015), and dry deposition from the inferential method using passive samplers (2010-2012). From mixed approaches with IER collectors and inferential methods, we determined that 7.2 ± 0.4 kgNha−1y−1 is deposited to protected Sonoran Desert within metropolitan Phoenix, Arizona and 6.1 ± 0.3 kgNha−1y−1 in nearby desert ecosystems. Regional scale models overestimated deposition rates for our sampling period by 60% and misidentified hot spots of deposition across the airshed. By contrast, the easy-deployment IER throughfall collectors showed minimal spatial variation across the urban-rural gradient and underestimated deposition fluxes by 54%, largely because of underestimated dry deposition in throughfall. However, seasonal sampling of the IER collectors over 10 years allowed us to capture significant seasonal variation in N deposition and the importance of precipitation timing. These results, derived from the longest, spatially and temporally explicit dataset in drylands, highlight the need for long-term, mixed methods to estimate atmospheric nutrient enrichment to aridlands in a rapidly changing world. Our findings highlight low rates of inorganic nitrogen deposition to protected Sonoran Desert ecosystems, the need for mixed methods, and the importance of season and timing of precipitation as primary drivers of atmospheric nutrient enrichment to aridland systems.