Umeå University's logo

umu.sePublikasjoner
Endre søk
Link to record
Permanent link

Direct link
Cheddad, Abbas
Publikasjoner (6 av 6) Visa alla publikasjoner
Cheddad, A., Nord, C., Hörnblad, A., Prunskaite-Hyyryläinen, R., Eriksson, M., Georgsson, F., . . . Ahlgren, U. (2013). Improving signal detection in emission optical projection tomography via single source multi-exposure image fusion. Optics Express, 21(14), 16584-16604
Åpne denne publikasjonen i ny fane eller vindu >>Improving signal detection in emission optical projection tomography via single source multi-exposure image fusion
Vise andre…
2013 (engelsk)Inngår i: Optics Express, E-ISSN 1094-4087, Vol. 21, nr 14, s. 16584-16604Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

We demonstrate a technique to improve structural data obtained from Optical Projection Tomography (OPT) using Image Fusion (IF) and contrast normalization. This enables the visualization of molecular expression patterns in biological specimens with highly variable contrast values. In the approach, termed IF-OPT, different exposures are fused by assigning weighted contrasts to each. When applied to projection images from mouse organs and digital phantoms our results demonstrate the capability of IF-OPT to reveal high and low signal intensity details in challenging specimens. We further provide measurements to highlight the benefits of the new algorithm in comparison to other similar methods.

sted, utgiver, år, opplag, sider
Optical Society of America, 2013
HSV kategori
Identifikatorer
urn:nbn:se:umu:diva-80512 (URN)10.1364/OE.21.016584 (DOI)000321819400038 ()23938510 (PubMedID)2-s2.0-84880537960 (Scopus ID)
Forskningsfinansiär
Swedish Research CouncilEU, European Research Council, CP-IP 228933-2
Tilgjengelig fra: 2013-09-19 Laget: 2013-09-19 Sist oppdatert: 2023-03-23bibliografisk kontrollert
Eriksson, A. U., Svensson, C., Hörnblad, A., Cheddad, A., Kostromina, E., Eriksson, M., . . . Ahlgren, U. (2013). Near infrared optical projection tomography for assessments of beta-cell mass distribution in diabetes research. Journal of Visualized Experiments, 71, Article ID e50238.
Åpne denne publikasjonen i ny fane eller vindu >>Near infrared optical projection tomography for assessments of beta-cell mass distribution in diabetes research
Vise andre…
2013 (engelsk)Inngår i: Journal of Visualized Experiments, E-ISSN 1940-087X, Vol. 71, artikkel-id e50238Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

By adapting OPT to include the capability of imaging in the near infrared (NIR) spectrum, we here illustrate the possibility to image larger bodies of pancreatic tissue, such as the rat pancreas, and to increase the number of channels (cell types) that may be studied in a single specimen. We further describe the implementation of a number of computational tools that provide: 1/ accurate positioning of a specimen's (in our case the pancreas) centre of mass (COM) at the axis of rotation (AR)2; 2/ improved algorithms for post-alignment tuning which prevents geometric distortions during the tomographic reconstruction2 and 3/ a protocol for intensity equalization to increase signal to noise ratios in OPT-based BCM determinations3. In addition, we describe a sample holder that minimizes the risk for unintentional movements of the specimen during image acquisition. Together, these protocols enable assessments of BCM distribution and other features, to be performed throughout the volume of intact pancreata or other organs (e.g. in studies of islet transplantation), with a resolution down to the level of individual islets of Langerhans.

HSV kategori
Identifikatorer
urn:nbn:se:umu:diva-64029 (URN)10.3791/50238 (DOI)000209226200052 ()23353681 (PubMedID)2-s2.0-84875029265 (Scopus ID)
Tilgjengelig fra: 2013-01-14 Laget: 2013-01-14 Sist oppdatert: 2026-06-12bibliografisk kontrollert
Yogarajah, P., Condell, J., Curran, K., McKevitt, P. & Cheddad, A. (2012). A dynamic threshold approach for skin tone detection in colour images. International Journal of Biometrics (IJBM), 4(1), 38-55
Åpne denne publikasjonen i ny fane eller vindu >>A dynamic threshold approach for skin tone detection in colour images
Vise andre…
2012 (engelsk)Inngår i: International Journal of Biometrics (IJBM), ISSN 1755-8301, E-ISSN 1755-831X, Vol. 4, nr 1, s. 38-55Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

This paper presents a novel dynamic threshold approach to discriminate skin pixels and non-skin pixels in colour images. Fixed decision boundaries (or fixed threshold) classification approaches are successfully applied to detect human skin tone in colour images. These fixed thresholds mostly failed in two situations as they only search for a certain skin colour range: • any non-skin object may be classified as skin if non-skin objects's colour values belong to fixed threshold range • any true skin may be mistakenly classified as non-skin if the skin colour values do not belong to fixed threshold range. Therefore in this paper, instead of predefined fixed thresholds, novel online learned dynamic thresholds are used to overcome the above drawbacks. The experimental results show that our method is robust in overcoming these drawbacks. © 2012 Inderscience Enterprises Ltd.

sted, utgiver, år, opplag, sider
InderScience Publishers, 2012
Emneord
Dynamic threshold, Skin tone detection
HSV kategori
Identifikatorer
urn:nbn:se:umu:diva-212658 (URN)10.1504/IJBM.2012.044291 (DOI)000214642800003 ()2-s2.0-84857299710 (Scopus ID)
Tilgjengelig fra: 2023-08-21 Laget: 2023-08-21 Sist oppdatert: 2023-08-21bibliografisk kontrollert
Cheddad, A., Svensson, C., Sharpe, J., Georgsson, F. & Ahlgren, U. (2012). Image processing assisted algorithms for optical projection tomography. IEEE Transactions on Medical Imaging, 31(1), 1-15
Åpne denne publikasjonen i ny fane eller vindu >>Image processing assisted algorithms for optical projection tomography
Vise andre…
2012 (engelsk)Inngår i: IEEE Transactions on Medical Imaging, ISSN 0278-0062, E-ISSN 1558-254X, Vol. 31, nr 1, s. 1-15Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

Since it was first presented in 2002, optical projection tomography (OPT) has emerged as a powerful tool for the study of biomedical specimen on the mm to cm scale. In this paper, we present computational tools to further improve OPT image acquisition and tomographic reconstruction. More specifically, these methods provide: semi-automatic and precise positioning of a sample at the axis of rotation and a fast and robust algorithm for determination of postalignment values throughout the specimen as compared to existing methods. These tools are easily integrated for use with current commercial OPT scanners and should also be possible to implement in "home made" or experimental setups for OPT imaging. They generally contribute to increase acquisition speed and quality of OPT data and thereby significantly simplify and improve a number of three-dimensional and quantitative OPT based assessments.

Emneord
artifacts, axis of rotation (AR), biomedical image processing, islets of Langerhans, optical projection tomography (OPT), pancreas, postalignment
HSV kategori
Identifikatorer
urn:nbn:se:umu:diva-51582 (URN)10.1109/TMI.2011.2161590 (DOI)000298782200001 ()21768046 (PubMedID)2-s2.0-84855396325 (Scopus ID)
Tilgjengelig fra: 2012-01-27 Laget: 2012-01-27 Sist oppdatert: 2023-03-23bibliografisk kontrollert
Hörnblad, A., Cheddad, A. & Ahlgren, U. (2011). An improved protocol for optical projection tomography imaging reveals lobular heterogeneities in pancreatic islet and β-cell mass distribution. Islets, 3(4), 204-208
Åpne denne publikasjonen i ny fane eller vindu >>An improved protocol for optical projection tomography imaging reveals lobular heterogeneities in pancreatic islet and β-cell mass distribution
2011 (engelsk)Inngår i: Islets, ISSN 1938-2014, Vol. 3, nr 4, s. 204-208Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

Optical projection tomography (OPT) imaging is a powerful tool for three-dimensional imaging of gene and protein distribution patterns in biomedical specimens. We have previously demonstrated the possibility, by this technique, to extract information of the spatial and quantitative distribution of the islets of Langerhans in the intact mouse pancreas. In order to further increase the sensitivity of OPT imaging for this type of assessment, we have developed a protocol implementing a computational statistical approach: contrast limited adaptive histogram equalization (CLAHE). We demonstrate that this protocol significantly increases the sensitivity of OPT imaging for islet detection, helps preserve islet morphology and diminish subjectivity in thresholding for tomographic reconstruction. When applied to studies of the pancreas from healthy C57BL/6 mice, our data reveal that, at least in this strain, the pancreas harbors substantially more islets than has previously been reported. Further, we provide evidence that the gastric, duodenal and splenic lobes of the pancreas display dramatic differences in total and relative islet and β-cell mass distribution. This includes a 75% higher islet density in the gastric lobe as compared to the splenic lobe and a higher relative volume of insulin producing cells in the duodenal lobe as compared to the other lobes. Altogether, our data show that CLAHE substantially improves OPT based assessments of the islets of Langerhans and that lobular origin must be taken into careful consideration in quantitative and spatial assessments of the pancreas.

sted, utgiver, år, opplag, sider
Austin: Landes Bioscience, 2011
Emneord
Animals, Cell Size, Computational Biology/*methods, Female, Image, Enhancement/methods, Imaging, Three-Dimensional/methods, Insulin-Secreting Cells/*cytology, Islets of Langerhans/*anatomy & histology, Mice, Mice, Inbred C57BL, Organ Size, Pancreas/anatomy & histology, Pancreas, Exocrine/anatomy & histology, Reproducibility of Results, Tomography, Optical/*methods
HSV kategori
Forskningsprogram
molekylär medicin (medicinska vetenskaper)
Identifikatorer
urn:nbn:se:umu:diva-50597 (URN)10.4161/isl.3.4.16417 (DOI)21633198 (PubMedID)2-s2.0-79960091945 (Scopus ID)
Tilgjengelig fra: 2011-12-15 Laget: 2011-12-15 Sist oppdatert: 2023-03-23bibliografisk kontrollert
Yogarajah, P., Condell, J., Curran, K., Mc Kevitt, P. & Cheddad, A. (2011). Embed, track and authenticate images online with SDW-WebCrawler. In: 2011 Irish Machine Vision and Image Processing Conference: . Paper presented at 2011 15th Irish Machine Vision and Image Processing Conference, IMVIP 2011, Dublin, Ireland, September 7-9, 2011 (pp. 76-81). IEEE
Åpne denne publikasjonen i ny fane eller vindu >>Embed, track and authenticate images online with SDW-WebCrawler
Vise andre…
2011 (engelsk)Inngår i: 2011 Irish Machine Vision and Image Processing Conference, IEEE, 2011, s. 76-81Konferansepaper, Publicerat paper (Fagfellevurdert)
Abstract [en]

The Internet is a widely open source to everyone to access Web pages. Using a web browser anyone can access websites. Because of this facility people can easily download images from websites without the owner's knowledge and use them in their own documents. Also image content may be modified for illegal purposes. Therefore a system is needed to authenticate images over the Web. Web image authentication is a challenging task that requires web crawlers to track and download images for authentication. Most of the known web image tracking engines such as TinEye and PicScout retrieve images according to the image infringement of the original image. However, these systems do not have the facility to authenticate the retrieved image, i.e. whether the retrieved image is similar to the original image or any image content alteration has occurred in the retrieved image and who is the copyrighted owner of the retrieved image.

In order to solve the above mentioned drawbacks this paper presents a framework to protect image content, track it over the internet and authenticate the content. The proposed framework is based on self-embedding (i.e. where secret data and a binary version of the image are encrypted and embedded into the image), tracking (i.e. where a web crawler traverses over the internet to download images) and self-authentication (i.e. where the binary version of the hidden data is extracted to authenticate the image). Also another advantage of the proposed system is that it does not need the original image for the authentication process. 

sted, utgiver, år, opplag, sider
IEEE, 2011
HSV kategori
Identifikatorer
urn:nbn:se:umu:diva-206431 (URN)10.1109/IMVIP.2011.22 (DOI)2-s2.0-84881000208 (Scopus ID)9780769546292 (ISBN)978-1-4673-0230-2 (ISBN)
Konferanse
2011 15th Irish Machine Vision and Image Processing Conference, IMVIP 2011, Dublin, Ireland, September 7-9, 2011
Tilgjengelig fra: 2023-04-06 Laget: 2023-04-06 Sist oppdatert: 2025-02-07bibliografisk kontrollert
Organisasjoner