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Publications (8 of 8) Show all publications
Monteux, S., Keuper, F., Fontaine, S., Gavazov, K., Hallin, S., Juhanson, J., . . . Dorrepaal, E. (2020). Carbon and nitrogen cycling in Yedoma permafrost controlled by microbial functional limitations. Nature Geoscience, 13(12), 794-+
Open this publication in new window or tab >>Carbon and nitrogen cycling in Yedoma permafrost controlled by microbial functional limitations
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2020 (English)In: Nature Geoscience, ISSN 1752-0894, E-ISSN 1752-0908, Vol. 13, no 12, p. 794-+Article in journal (Refereed) Published
Abstract [en]

Warming-induced microbial decomposition of organic matter in permafrost soils constitutes a climate-change feedback of uncertain magnitude. While physicochemical constraints on soil functioning are relatively well understood, the constraints attributable to microbial community composition remain unclear. Here we show that biogeochemical processes in permafrost can be impaired by missing functions in the microbial community-functional limitations-probably due to environmental filtering of the microbial community over millennia-long freezing. We inoculated Yedoma permafrost with a functionally diverse exogenous microbial community to test this mechanism by introducing potentially missing microbial functions. This initiated nitrification activity and increased CO2 production by 38% over 161 days. The changes in soil functioning were strongly associated with an altered microbial community composition, rather than with changes in soil chemistry or microbial biomass. The present permafrost microbial community composition thus constrains carbon and nitrogen biogeochemical processes, but microbial colonization, likely to occur upon permafrost thaw in situ, can alleviate such functional limitations. Accounting for functional limitations and their alleviation could strongly increase our estimate of the vulnerability of permafrost soil organic matter to decomposition and the resulting global climate feedback. Carbon dioxide emissions from permafrost thaw are substantially enhanced by relieving microbial functional limitations, according to incubation experiments on Yedoma permafrost.

Place, publisher, year, edition, pages
Nature Publishing Group, 2020
National Category
Climate Science
Identifiers
urn:nbn:se:umu:diva-178230 (URN)10.1038/s41561-020-00662-4 (DOI)000594838900006 ()2-s2.0-85096920794 (Scopus ID)
Available from: 2021-01-07 Created: 2021-01-07 Last updated: 2025-02-07Bibliographically approved
Keuper, F., Wild, B., Kummu, M., Beer, C., Blume-Werry, G., Fontaine, S., . . . Dorrepaal, E. (2020). Carbon loss from northern circumpolar permafrost soils amplified by rhizosphere priming. Nature Geoscience, 13(8), 560-565
Open this publication in new window or tab >>Carbon loss from northern circumpolar permafrost soils amplified by rhizosphere priming
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2020 (English)In: Nature Geoscience, ISSN 1752-0894, E-ISSN 1752-0908, Vol. 13, no 8, p. 560-565Article in journal (Refereed) Published
Abstract [en]

As global temperatures continue to rise, a key uncertainty of climate projections is the microbial decomposition of vast organic carbon stocks in thawing permafrost soils. Decomposition rates can accelerate up to fourfold in the presence of plant roots, and this mechanism—termed the rhizosphere priming effect—may be especially relevant to thawing permafrost soils as rising temperatures also stimulate plant productivity in the Arctic. However, priming is currently not explicitly included in any model projections of future carbon losses from the permafrost area. Here, we combine high-resolution spatial and depth-resolved datasets of key plant and permafrost properties with empirical relationships of priming effects from living plants on microbial respiration. We show that rhizosphere priming amplifies overall soil respiration in permafrost-affected ecosystems by ~12%, which translates to a priming-induced absolute loss of ~40 Pg soil carbon from the northern permafrost area by 2100. Our findings highlight the need to include fine-scale ecological interactions in order to accurately predict large-scale greenhouse gas emissions, and suggest even tighter restrictions on the estimated 200 Pg anthropogenic carbon emission budget to keep global warming below 1.5 °C.

Place, publisher, year, edition, pages
Nature Publishing Group, 2020
National Category
Climate Science
Identifiers
urn:nbn:se:umu:diva-173916 (URN)10.1038/s41561-020-0607-0 (DOI)000550620700001 ()2-s2.0-85088262039 (Scopus ID)
Funder
Swedish Research Council, 621-2011-5444Swedish Research Council Formas, 214-2011-788Knut and Alice Wallenberg Foundation, KAW 2012.0152Academy of Finland, 267463Academy of Finland, 305471German Research Foundation (DFG), BE 6485/1-1
Available from: 2020-08-06 Created: 2020-08-06 Last updated: 2025-02-07Bibliographically approved
Väisänen, M., Krab, E. J., Monteux, S., Teuber, L. M., Gavazov, K., Weedon, J. T., . . . Dorrepaal, E. (2020). Meshes in mesocosms control solute and biota exchange in soils: A step towards disentangling (a)biotic impacts on the fate of thawing permafrost. Agriculture, Ecosystems & Environment. Applied Soil Ecology, 151, Article ID UNSP 103537.
Open this publication in new window or tab >>Meshes in mesocosms control solute and biota exchange in soils: A step towards disentangling (a)biotic impacts on the fate of thawing permafrost
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2020 (English)In: Agriculture, Ecosystems & Environment. Applied Soil Ecology, ISSN 0929-1393, E-ISSN 1873-0272, Vol. 151, article id UNSP 103537Article in journal (Refereed) Published
Abstract [en]

Environmental changes feedback to climate through their impact on soil functions such as carbon (C) and nutrient sequestration. Abiotic conditions and the interactions between above- and belowground biota drive soil responses to environmental change but these (a)biotic interactions are challenging to study. Nonetheless, better understanding of these interactions would improve predictions of future soil functioning and the soil-climate feedback and, in this context, permafrost soils are of particular interest due to their vast soil C-stores. We need new tools to isolate abiotic (microclimate, chemistry) and biotic (roots, fauna, microorganisms) components and to identify their respective roles in soil processes. We developed a new experimental setup, in which we mimic thermokarst (permafrost thaw-induced soil subsidence) by fitting thawed permafrost and vegetated active layer sods side by side into mesocosms deployed in a subarctic tundra over two growing seasons. In each mesocosm, the two sods were separated from each other by barriers with different mesh sizes to allow varying degrees of physical connection and, consequently, (a)biotic exchange between active layer and permafrost. We demonstrate that our mesh-approach succeeded in controlling 1) lateral exchange of solutes between the two soil types, 2) colonization of permafrost by microbes but not by soil fauna, and 3) ingrowth of roots into permafrost. In particular, experimental thermokarst induced a similar to 60% decline in permafrost nitrogen (N) content, a shift in soil bacteria and a rapid buildup of root biomass (+33.2 g roots m(-2) soil). This indicates that cascading plant-soil-microbe linkages are at the heart of biogeochemical cycling in thermokarst events. We propose that this novel setup can be used to explore the effects of (a)biotic ecosystem components on focal biogeochemical processes in permafrost soils and beyond.

Place, publisher, year, edition, pages
Elsevier, 2020
National Category
Soil Science
Identifiers
urn:nbn:se:umu:diva-169880 (URN)10.1016/j.apsoil.2020.103537 (DOI)000523298300008 ()2-s2.0-85078663670 (Scopus ID)
Available from: 2020-04-29 Created: 2020-04-29 Last updated: 2023-03-24Bibliographically approved
Krab, E. J., Roennefarth, J., Becher, M., Blume-Werry, G., Keuper, F., Klaminder, J., . . . Dorrepaal, E. (2018). Winter warming effects on tundra shrub performance are species-specific and dependent on spring conditions. Journal of Ecology, 106(2), 599-612
Open this publication in new window or tab >>Winter warming effects on tundra shrub performance are species-specific and dependent on spring conditions
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2018 (English)In: Journal of Ecology, ISSN 0022-0477, E-ISSN 1365-2745, Vol. 106, no 2, p. 599-612Article in journal (Refereed) Published
Abstract [en]

Climate change-driven increases in winter temperatures positively affect conditions for shrub growth in arctic tundra by decreasing plant frost damage and stimulation of nutrient availability. However, the extent to which shrubs may benefit from these conditions may be strongly dependent on the following spring climate. Species-specific differences in phenology and spring frost sensitivity likely affect shrub growth responses to warming. Additionally, effects of changes in winter and spring climate may differ over small spatial scales, as shrub growth may be dependent on natural variation in snow cover, shrub density and cryoturbation. We investigated the effects of winter warming and altered spring climate on growing-season performance of three common and widespread shrub species in cryoturbated non-sorted circle arctic tundra. By insulating sparsely vegetated non-sorted circles and parts of the surrounding heath with additional snow or gardening fleeces, we created two climate change scenarios: snow addition increased soil temperatures in autumn and winter and delayed snowmelt timing without increasing spring temperatures, whereas fleeces increased soil temperature similarly in autumn and winter, but created warmer spring conditions without altering snowmelt timing. Winter warming affected shrub performance, but the direction and magnitude were species-specific and dependent on spring conditions. Spring warming advanced, and later snowmelt delayed canopy green-up. The fleece treatment did not affect shoot growth and biomass in any shrub species despite decreasing leaf frost damage in Empetrum nigrum. Snow addition decreased frost damage and stimulated growth of Vaccinium vitis-idaea by c. 50%, while decreasing Betula nana growth (p < .1). All of these effects were consistent the mostly barren circles and surrounding heath. Synthesis. In cryoturbated arctic tundra, growth of Vaccinium vitis-idaea may substantially increase when a thicker snow cover delays snowmelt, whereas in longer term, warmer winters and springs may favour E. nigrum instead. This may affect shrub community composition and cover, with potentially far-reaching effects on arctic ecosystem functioning via its effects on cryoturbation, carbon cycling and trophic cascading. Our results highlight the importance of disentangling effects of winter and spring climate change timing and nature, as spring conditions are a crucial factor in determining the impact of winter warming on plant performance.

Place, publisher, year, edition, pages
John Wiley & Sons, 2018
Keywords
Betula nana, cryoturbation, Empetrum nigrum, plant phenology, shrubs, snow cover, snowmelt ming, spring climate, Vaccinium vitis-idaea, winter climate change
National Category
Botany Environmental Sciences Climate Science
Identifiers
urn:nbn:se:umu:diva-145370 (URN)10.1111/1365-2745.12872 (DOI)000425046300013 ()2-s2.0-85031854690 (Scopus ID)
Available from: 2018-03-12 Created: 2018-03-12 Last updated: 2025-02-01Bibliographically approved
Keuper, F., Dorrepaal, E., van Bodegom, P. M., van Logtestijn, R., Venhuizen, G., van Hal, J. & Aerts, R. (2017). Experimentally increased nutrient availability at the permafrost thaw front selectively enhances biomass production of deep-rooting subarctic peatland species. Global Change Biology, 23(10), 4257-4266
Open this publication in new window or tab >>Experimentally increased nutrient availability at the permafrost thaw front selectively enhances biomass production of deep-rooting subarctic peatland species
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2017 (English)In: Global Change Biology, ISSN 1354-1013, E-ISSN 1365-2486, Vol. 23, no 10, p. 4257-4266Article in journal (Refereed) Published
Abstract [en]

Climate warming increases nitrogen (N) mineralization in superficial soil layers (the dominant rooting zone) of subarctic peatlands. Thawing and subsequent mineralization of permafrost increases plant-available N around the thaw-front. Because plant production in these peatlands is N-limited, such changes may substantially affect net primary production and species composition. We aimed to identify the potential impact of increased N-availability due to permafrost thawing on subarctic peatland plant production and species performance, relative to the impact of increased N-availability in superficial organic layers. Therefore, we investigated whether plant roots are present at the thaw-front (45 cm depth) and whether N-uptake (N-15-tracer) at the thaw-front occurs during maximum thaw-depth, coinciding with the end of the growing season. Moreover, we performed a unique 3-year belowground fertilization experiment with fully factorial combinations of deep-(thaw-front) and shallow-fertilization (10 cm depth) and controls. We found that certain species are present with roots at the thaw-front (Rubus chamaemorus) and have the capacity (R. chamaemorus, Eriophorum vaginatum) for N-uptake from the thaw-front between autumn and spring when aboveground tissue is largely senescent. In response to 3-year shallow-belowground fertilization (S) both shallow-(Empetrum hermaphroditum) and deep-rooting species increased aboveground biomass and N-content, but only deep-rooting species responded positively to enhanced nutrient supply at the thaw-front (D). Moreover, the effects of shallow-fertilization and thaw-front fertilization on aboveground biomass production of the deep-rooting species were similar in magnitude (S: 71%; D: 111% increase compared to control) and additive (S + D: 181% increase). Our results show that plant-available N released from thawing permafrost can form a thus far overlooked additional N-source for deep-rooting subarctic plant species and increase their biomass production beyond the already established impact of warming-driven enhanced shallow N-mineralization. This may result in shifts in plant community composition and may partially counteract the increased carbon losses from thawing permafrost.

Place, publisher, year, edition, pages
WILEY, 2017
Keywords
belowground nitrogen, climate change, Empetrum hermaphroditum, fertilization, frozen soil, perrmafrost thaw, root uptake, Rubus chamaemorus
National Category
Botany
Identifiers
urn:nbn:se:umu:diva-140025 (URN)10.1111/gcb.13804 (DOI)000410642100024 ()28675586 (PubMedID)2-s2.0-85026324139 (Scopus ID)
Available from: 2017-10-02 Created: 2017-10-02 Last updated: 2023-03-24Bibliographically approved
Abbott, B. W., Jones, J. B., Schuur, E. A. G., Chapin, F. S., Bowden, W. B., Bret-Harte, M. S., . . . Zimov, S. (2016). Biomass offsets little or none of permafrost carbon release from soils, streams, and wildfire: an expert assessment. Environmental Research Letters, 11(3), Article ID 034014.
Open this publication in new window or tab >>Biomass offsets little or none of permafrost carbon release from soils, streams, and wildfire: an expert assessment
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2016 (English)In: Environmental Research Letters, E-ISSN 1748-9326, Vol. 11, no 3, article id 034014Article in journal (Refereed) Published
Abstract [en]

As the permafrost region warms, its large organic carbon pool will be increasingly vulnerable to decomposition, combustion, and hydrologic export. Models predict that some portion of this release will be offset by increased production of Arctic and boreal biomass; however, the lack of robust estimates of net carbon balance increases the risk of further overshooting international emissions targets. Precise empirical or model-based assessments of the critical factors driving carbon balance are unlikely in the near future, so to address this gap, we present estimates from 98 permafrost-region experts of the response of biomass, wildfire, and hydrologic carbon flux to climate change. Results suggest that contrary to model projections, total permafrost-region biomass could decrease due to water stress and disturbance, factors that are not adequately incorporated in current models. Assessments indicate that end-of-the-century organic carbon release from Arctic rivers and collapsing coastlines could increase by 75% while carbon loss via burning could increase four-fold. Experts identified water balance, shifts in vegetation community, and permafrost degradation as the key sources of uncertainty in predicting future system response. In combination with previous findings, results suggest the permafrost region will become a carbon source to the atmosphere by 2100 regardless of warming scenario but that 65%-85% of permafrost carbon release can still be avoided if human emissions are actively reduced.

Keywords
permafrost carbon, Arctic, boreal, wildfire, dissolved organic carbon, particulate organic carbon, coastal erosion
National Category
Climate Science Earth and Related Environmental Sciences
Identifiers
urn:nbn:se:umu:diva-120651 (URN)10.1088/1748-9326/11/3/034014 (DOI)000373401400017 ()2-s2.0-84962306957 (Scopus ID)
Available from: 2016-08-01 Created: 2016-05-18 Last updated: 2025-02-01Bibliographically approved
Krab, E. J., Aerts, R., Berg, M. P., van Hal, J. & Keuper, F. (2014). Northern peatland Collembola communities unaffected by three summers of simulated extreme precipitation. Agriculture, Ecosystems & Environment. Applied Soil Ecology, 79, 70-76
Open this publication in new window or tab >>Northern peatland Collembola communities unaffected by three summers of simulated extreme precipitation
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2014 (English)In: Agriculture, Ecosystems & Environment. Applied Soil Ecology, ISSN 0929-1393, E-ISSN 1873-0272, Vol. 79, p. 70-76Article in journal (Refereed) Published
Abstract [en]

Extreme climate events are observed and predicted to increase in frequency and duration in high-latitudeecosystems as a result of global climate change. This includes extreme precipitation events, which maydirectly impact on belowground food webs and ecosystem functioning by their physical impacts and byaltering local soil moisture conditions.

We assessed responses of the Collembola community in a northern Sphagnum fuscum-dominatedombrotrophic peatland to three years of experimentally increased occurrence of extreme precipitationevents. Annual summer precipitation was doubled (an increase of 200 mm) by 16 simulated extremerain events within the three months growing season, where on each occasion 12.5 mm of rain was addedwithin a few minutes. Despite this high frequency and intensity of the rain events, no shifts in Collemboladensity, relative species abundances and community weighted means of three relevant traits (moisturepreference, vertical distribution and body size) were observed. This strongly suggests that the peatlandCollembola community is unaffected by the physical impacts of extreme precipitation and the short-termvariability in moisture conditions. The lack of response is most likely reinforced by the fact that extremeprecipitation events do not seem to alter longer-term soil moisture conditions in the peat layers inhabitedby soil fauna.

This study adds evidence to the observation that the biotic components of northern ombrotrophicpeatlands are hardly responsive to an increase in extreme summer precipitation events. Given the importance of these ecosystems for the global C balance, these findings significantly contribute to the currentknowledge of the ecological impact of future climate scenarios. (C) 2014 Elsevier B.V. All rights reserved.

Keywords
Extreme events, Precipitation, Soil fauna, Peat bog, Functional traits, Community weighted mean
National Category
Ecology
Identifiers
urn:nbn:se:umu:diva-90754 (URN)10.1016/j.apsoil.2014.03.007 (DOI)000335906700007 ()2-s2.0-84897935671 (Scopus ID)
Available from: 2014-10-10 Created: 2014-07-01 Last updated: 2023-03-24Bibliographically approved
Keuper, F., Parmentier, F.-J. W., Blok, D., van Bodegom, P. M., Dorrepaal, E., van Hal, J. R., . . . Aerts, R. (2012). Tundra in the rain: Differential vegetation responses to three years of experimentally doubled summer precipitation in Siberian shrub and Swedish bog tundra. Ambio, 41(Suppl. 3), 269-280
Open this publication in new window or tab >>Tundra in the rain: Differential vegetation responses to three years of experimentally doubled summer precipitation in Siberian shrub and Swedish bog tundra
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2012 (English)In: Ambio, ISSN 0044-7447, E-ISSN 1654-7209, Vol. 41, no Suppl. 3, p. 269-280Article in journal (Refereed) Published
Abstract [en]

Precipitation amounts and patterns at high latitude sites have been predicted to change as a result of global climatic changes. We addressed vegetation responses to three years of experimentally increased summer precipitation in two previously unaddressed tundra types: Betula nana-dominated shrub tundra (northeast Siberia) and a dry Sphagnum fuscum-dominated bog (northern Sweden). Positive responses to approximately doubled ambient precipitation (an increase of 200 mm year(-1)) were observed at the Siberian site, for B. nana (30 % larger length increments), Salix pulchra (leaf size and length increments) and Arctagrostis latifolia (leaf size and specific leaf area), but none were observed at the Swedish site. Total biomass production did not increase at either of the study sites. This study corroborates studies in other tundra vegetation types and shows that despite regional differences at the plant level, total tundra plant productivity is, at least at the short or medium term, largely irresponsive to experimentally increased summer precipitation.

Place, publisher, year, edition, pages
Springer Netherlands, 2012
Keywords
Water addition, Plant traits, Irrigation, Primary production, Subarctic, High latitude
National Category
Climate Science Earth and Related Environmental Sciences Ecology
Identifiers
urn:nbn:se:umu:diva-58915 (URN)10.1007/s13280-012-0305-2 (DOI)000307285200010 ()2-s2.0-84867440545 (Scopus ID)
Available from: 2012-09-07 Created: 2012-09-06 Last updated: 2025-02-07Bibliographically approved
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Identifiers
ORCID iD: ORCID iD iconorcid.org/0000-0001-8673-7991

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