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Singh, Bhupender
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Publications (10 of 12) Show all publications
Singh, B., Mortezaei, N., Savarino, S. J., Uhlin, B. E., Bullitt, E. & Andersson, M. (2017). Antibodies damage the resilience of fimbriae, causing them to be stiff and tangled. Journal of Bacteriology, 199(1), Article ID e00665-16.
Open this publication in new window or tab >>Antibodies damage the resilience of fimbriae, causing them to be stiff and tangled
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2017 (English)In: Journal of Bacteriology, ISSN 0021-9193, E-ISSN 1098-5530, Vol. 199, no 1, article id e00665-16Article in journal (Refereed) Published
Abstract [en]

As adhesion fimbriae are a major virulence factor for many pathogenic Gram-negative bacteria, they are also potential targets for antibodies. Fimbriae are commonly required for initiating the colonization that leads to disease, and their success as adhesion organelles lies in their ability to both initiate and sustain bacte- rial attachment to epithelial cells. The ability of fimbriae to unwind and rewind their helical filaments presumably reduces their detachment from tissue surfaces with the shear forces that accompany significant fluid flow. Therefore, the disruption of func- tional fimbriae by inhibiting this resilience should have high potential for use as a vaccine to prevent disease. In this study, we show that two characteristic biome- chanical features of fimbrial resilience, namely, the extension force and the exten- sion length, are significantly altered by the binding of antibodies to fimbriae. The fimbriae that were studied are normally expressed on enterotoxigenic Escherichia coli, which are a major cause of diarrheal disease. This alteration in biomechanical properties was observed with bivalent polyclonal antifimbrial antibodies that recog- nize major pilin subunits but not with the Fab fragments of these antibodies. Thus, we propose that the mechanism by which bound antibodies disrupt the uncoiling of natural fimbria under force is by clamping together layers of the helical filament, thereby increasing their stiffness and reducing their resilience during fluid flow. In addition, we propose that antibodies tangle fimbriae via bivalent binding, i.e., by binding to two individual fimbriae and linking them together. Use of antibodies to disrupt physical properties of fimbriae may be generally applicable to the large number of Gram-negative bacteria that rely on these surface-adhesion molecules as an essential virulence factor.

I M P O R T A N C E Our study shows that the resiliency of colonization factor antigen I (CFA/I) and coli surface antigen 2 (CS2) fimbriae, which are current targets for vac- cine development, can be compromised significantly in the presence of antifimbrial antibodies. It is unclear how the humoral immune system specifically interrupts in- fection after the attachment of enterotoxigenic Escherichia coli (ETEC) to the epithe- lial surface. Our study indicates that immunoglobulins, in addition to their well- documented role in adaptive immunity, can mechanically damage the resilience of fimbriae of surface-attached ETEC, thereby revealing a new mode of action. Our data suggest a mechanism whereby antibodies coat adherent and free-floating bacteria to impede fimbrial resilience. Further elucidation of this possible mechanism is likely to inform the development and refinement of preventive vaccines against ETEC diar- rhea. 

Keywords
pili, IgG, vaccine, CFA/I, CS2, optical tweezers
National Category
Biophysics Immunology Other Physics Topics
Identifiers
urn:nbn:se:umu:diva-119692 (URN)10.1128/JB.00665-16 (DOI)000391288200018 ()2-s2.0-85008488016 (Scopus ID)
Funder
Swedish Research Council, 621- 2013-5379Swedish Research Council, 2012-4638NIH (National Institute of Health), RR025434
Note

Originally published in manuscript form with title "Antibodies damage fimbrial resilience, making them stiff and tangled"

Available from: 2016-04-25 Created: 2016-04-25 Last updated: 2025-02-20Bibliographically approved
Zakrisson, J., Singh, B., Svenmarker, P., Wiklund, K., Zhang, H., Hakobyan, S., . . . Andersson, M. (2016). Detecting Bacterial Surface Organelles on Single Cells using Optical Tweezers. Langmuir, 32(18), 4521-4529
Open this publication in new window or tab >>Detecting Bacterial Surface Organelles on Single Cells using Optical Tweezers
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2016 (English)In: Langmuir, ISSN 0743-7463, E-ISSN 1520-5827, Vol. 32, no 18, p. 4521-4529Article in journal (Refereed) Published
Abstract [en]

Bacterial cells display a diverse array of surface organelles that are important for a range of processes such as: intercellular communication, motility and adhesion leading to biofilm formation, infections and bacterial spread. More specifically, attachment to host cells by Gram-negative bacteria are mediated by adhesion pili, which are nm wide and µm long fibrous organelles. Since these pili are significantly thinner than the wavelength of visible light, they cannot be detected using standard light microscopy techniques. At present, there is no fast and simple method available to investigate if a single cell expresses pili while keeping the cell alive for further studies. In this study, we present a method to determine the presence of pili on a single bacterium. The protocol involves imaging the bacterium to measure its size, followed by predicting the fluid drag based on its size using an analytical model, and thereafter oscillating the sample while a single bacterium is trapped by an optical tweezer to measure its effective fluid drag. Comparison between the predicted and the measured fluid drag thereby indicate the presence of pili. Herein, we verify the method using polymer coated silica microspheres and Escherichia coli bacteria expressing adhesion pili. Our protocol, can in real time and within seconds assist single cell studies by distinguishing between piliated and non-piliated bacteria.

Place, publisher, year, edition, pages
American Chemical Society (ACS), 2016
National Category
Physical Chemistry Materials Engineering Atom and Molecular Physics and Optics
Identifiers
urn:nbn:se:umu:diva-119441 (URN)10.1021/acs.langmuir.5b03845 (DOI)000375809100015 ()27088225 (PubMedID)2-s2.0-84969674440 (Scopus ID)
Funder
Swedish Research Council, 2013-5379
Available from: 2016-04-19 Created: 2016-04-19 Last updated: 2024-07-02Bibliographically approved
Mortezaei, N., Epler, C., Shao, P., Shirdel, M., Singh, B., McVeigh, A., . . . Bullitt, E. (2015). Adhesion Pili from Enterotoxigenic Escherichia coli Share Similar Biophysical Properties Despite Their Different Assembly Pathways. Microscopy and Microanalysis, 21, 915-916
Open this publication in new window or tab >>Adhesion Pili from Enterotoxigenic Escherichia coli Share Similar Biophysical Properties Despite Their Different Assembly Pathways
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2015 (English)In: Microscopy and Microanalysis, ISSN 1431-9276, E-ISSN 1435-8115, Vol. 21, p. 915-916Article in journal (Refereed) Published
National Category
Other Physics Topics Biological Sciences Biophysics
Identifiers
urn:nbn:se:umu:diva-129634 (URN)10.1017/S1431927615005371 (DOI)
Note

Supplement 3

Available from: 2017-01-05 Created: 2017-01-05 Last updated: 2025-02-20Bibliographically approved
Mortezaei, N., Singh, B., Uhlin, B. E., Savarino, S., Bullitt, E. & Andersson, M. (2015). Antibodies Change the Mechanics of Adhesion Fimbriae: a Case Study of CS20 Fimbriae Expressed by Enterotoxigenic Escherichia Coli. Paper presented at 59th Annual Meeting of the Biophysical-Society, Baltimore, February 7-11, 2015.. Biophysical Journal, 108, 602
Open this publication in new window or tab >>Antibodies Change the Mechanics of Adhesion Fimbriae: a Case Study of CS20 Fimbriae Expressed by Enterotoxigenic Escherichia Coli
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2015 (English)In: Biophysical Journal, ISSN 0006-3495, E-ISSN 1542-0086, Vol. 108, p. 602-Article in journal, Meeting abstract (Other academic) Published
Abstract [en]

Enterotoxigenic Escherichia coli (ETEC) express a variety of fimbriae that mediate adhesion to host epithelial cells. It has been shown that the ability of a fimbriated bacterial cell to attach and stay attached to host cells does not merely depend on the adhesin expressed distal of the fimbriae but also the biomechanical properties of the fimbriae are vital for sustained adhesion. Fimbriae can significantly extend under a constant force when exposed to an external force and therefore reduce the load on the adhesin, which is believed to help bacteria to withstand external forces applied by various body defense systems. Thus, it is thought that the fimbrial shaft and adhesin have co-evolved for optimal function when bacteria attach to host cells. To investigate if antibodies, normally found in the intestines, affects the biomechanical properties of fimbriae, we exposed CS20 fimbriae expressed by ETEC to anti-fimbrial antibodies and measured these properties using optical tweezers force spectroscopy. Our data show a change in the force required to extend the fimbriae and that the elasticity is significantly reduced by the presence of antibodies. The reduced elasticity, likely due to cross-linking of fimbrial subunits, could thus be another assignment for antibodies; in addition to their mission in marking bacteria as foreign, our data indicate that antibodies physically compromise fimbrial function. To further confirm interaction of antibodies to their specific target we performed western blot analysis, transmission electron microscopy and immunofluoresence microscopy. In the presence of antibodies, we suggest that our assay and results will be a starting point for further studies aimed at inhibiting bacterial adhesion by antibodies.

Place, publisher, year, edition, pages
Cell Press, 2015
National Category
Biophysics
Identifiers
urn:nbn:se:umu:diva-100729 (URN)10.1016/j.bpj.2014.11.3276 (DOI)000362849600643 ()
Conference
59th Annual Meeting of the Biophysical-Society, Baltimore, February 7-11, 2015.
Note

Supplement: 1

Meeting Abstract: 3035-Pos

Available from: 2015-03-09 Created: 2015-03-09 Last updated: 2025-02-20Bibliographically approved
Singh, B., Mortezaei, N., Uhlin, B. E., Savarino, S., Bullitt, E. & Andersson, M. (2015). Antibody-mediated disruption of the mechanics of CS20 fimbriae of enterotoxigenic Escherichia coli. Scientific Reports, 5, Article ID 13678.
Open this publication in new window or tab >>Antibody-mediated disruption of the mechanics of CS20 fimbriae of enterotoxigenic Escherichia coli
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2015 (English)In: Scientific Reports, E-ISSN 2045-2322, Vol. 5, article id 13678Article in journal (Refereed) Published
Abstract [en]

Preventive vaccines against enterotoxigenic Escherichia coli (ETEC) are being developed, many of which target common fimbrial colonization factors as the major constituent, based on empirical evidence that these function as protective antigens. Particularly, passive oral administration of ETEC anti-fimbrial antibodies prevent ETEC diarrhea. Little is, however, known regarding the specific mechanisms by which intestinal antibodies against ETEC fimbriae function to prevent disease. Using coli surface antigen 20 (CS20) fimbriae as a model ETEC colonization factor, we show using force spectroscopy that anti-fimbrial antibodies diminish fimbrial elasticity by inhibiting their natural capacity to unwind and rewind. In the presence of anti-CS20 antibodies the force required to unwind a single fimbria was increased several-fold and the extension length was shortened several-fold. Similar measurements in the presence of anti-CS20 Fab fragments did not show any effect, indicating that bivalent antibody binding is required to reduce fimbrial elasticity. Based on these findings, we propose a model for an in-vivo mechanism whereby antibody-mediated disruption of the biomechanical properties of CS20 fimbriae impedes sustained adhesion of ETEC to the intestinal mucosal surface. Further elucidation of the role played by intestinal antibodies in mechanical disruption of fimbrial function may provide insights relevant to ETEC vaccine development.

National Category
Biophysics Immunology Other Physics Topics Nano Technology
Identifiers
urn:nbn:se:umu:diva-108176 (URN)10.1038/srep13678 (DOI)000361806400001 ()2-s2.0-84942357934 (Scopus ID)
Funder
Swedish Research Council
Available from: 2015-09-04 Created: 2015-09-04 Last updated: 2025-02-20Bibliographically approved
Mortezaei, N., Singh, B., Zakrisson, J., Bullitt, E. & Andersson, M. (2015). Biomechanical and Structural features of CS2 fimbriae of Enterotoxigenic Escherichia coli . Biophysical Journal, 109(1), 49-56
Open this publication in new window or tab >>Biomechanical and Structural features of CS2 fimbriae of Enterotoxigenic Escherichia coli 
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2015 (English)In: Biophysical Journal, ISSN 0006-3495, E-ISSN 1542-0086, Vol. 109, no 1, p. 49-56Article in journal (Refereed) Published
Abstract [en]

Enterotoxigenic Escherichia coli (ETEC) are a major cause of diarrhea worldwide, and infection of children in underdeveloped countries often leads to high mortality rates. Isolated ETEC express a plethora of colonization factors (fimbriae/pili), of which CFA/I and CFA/II that are assembled via the alternate chaperone pathway (ACP), are amongst the most common. Fimbriae are filamentous structures, whose shafts are primarily composed of helically arranged single pilin-protein subunits, with a unique biomechanical capability allowing them to unwind and rewind. A sustained ETEC infection, under adverse conditions of dynamic shear forces, is primarily attributed to this biomechanical feature of ETEC fimbriae. Recent understandings about the role of fimbriae as virulence factors are pointing to an evolutionary adaptation of their structural and biomechanical features. In this work, we investigated the biophysical properties of CS2 fimbriae from the CFA/II group. Homology modelling its major structural subunit CotA reveals structural clues and these are related to the niche in which they are expressed. Using optical tweezers force spectroscopy we found that CS2 fimbriae unwind at a constant force of 10 pN and have a corner velocity of 1300 nm/s, i.e., the velocity at which the force required for unwinding rises exponentially with increased speed. The biophysical properties of CS2 fimbriae assessed in this work classify them into a low-force unwinding group of fimbriae together with the CFA/I and CS20 fimbriae expressed by ETEC strains. The three fimbriae are expressed by ETEC, colonize in similar gut environments, and exhibit similar biophysical features, but differ in their biogenesis. Our observation suggests that the environment has a strong impact on the biophysical characteristics of fimbriae expressed by ETEC.

Place, publisher, year, edition, pages
Elsevier, 2015
Keywords
pili, optical tweezers, bacteria, pathogenesis, virulence factors
National Category
Other Physics Topics
Research subject
Physics
Identifiers
urn:nbn:se:umu:diva-103247 (URN)10.1016/j.bpj.2015.05.022 (DOI)000357670700007 ()26153701 (PubMedID)2-s2.0-84936769735 (Scopus ID)
Funder
Swedish Research Council, 621-2013-5379
Note

This work was supported by NIH (GM05722 and RR025434 to E.B.), the Swedish Research Council (621-2013-5379 to M.A. and the Carl Trygger foundation to M.A.

Available from: 2015-05-19 Created: 2015-05-19 Last updated: 2024-07-02Bibliographically approved
Mortezaei, N., Singh, B., Bullitt, E., Zakrisson, J., Epler, C., Wiklund, K. & Andersson, M. (2015). Structural and biophysical comparison of UPEC and ETEC adhesion fimbriae. Paper presented at 59th Annual Meeting of the Biophysical-Society, Baltimore, February 7-11, 2015. Biophysical Journal, 108(2, suppl 1), 527A-527A
Open this publication in new window or tab >>Structural and biophysical comparison of UPEC and ETEC adhesion fimbriae
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2015 (English)In: Biophysical Journal, ISSN 0006-3495, E-ISSN 1542-0086, Vol. 108, no 2, suppl 1, p. 527A-527AArticle in journal, Meeting abstract (Refereed) Published
Abstract [en]

Adhesion fimbriae (pili) of uropathogenic and enterotoxigenic Escherichia coli (UPEC and ETEC, respectively) facilitate adherence of the bacteria to target cells. Fimbriae are absolutely necessary for colonization and biofilm formation in the initiation of disease. The types of fimbriae expressed on the bacterial surface vary with the preferred environmental niche of the bacterial strain. For example, UPEC that express P-pili are most frequently associated pyelonephritis, an infection in the upper urinary tract, whereas bacteria that express type 1 fimbriae commonly cause cystitis through infection of the lower urinary tract. In contrast, ETEC expressing CFA/I and CS2 pili are associated with diarrheal diseases, initiating disease in the small intestines.

Although expressed in different enviroments, these fimbriae share basic structural and biomechanical features. Structurally, they are all long (1-4 μm), thin (7-8 nm diameter) helix-like filaments that extend from the bacterial surface. Biomechanically, they share the ability to be extended into a thinner filament (2-3 nm diameter) by unwinding of the helical filament under a constant force. However, the force required to unwind is specific to each fimbrial type. In addition, the dependence of the force required to unwind a fimbria on the velocity of this unwinding, (that is, the kinetics of unwinding), is also type-specific and highly variable. These biomechanical parameters are dissimilar for UPEC and ETEC expressed fimbriae, separating them into two distinct groups. Using force spectroscopy data, helical reconstructions from electron microscopy data, and computational simulations, we show in this work how these pronounced biomechanical differences may be beneficial for bacterial survival in a given environment.

Place, publisher, year, edition, pages
Cell Press, 2015
National Category
Biophysics
Identifiers
urn:nbn:se:umu:diva-100804 (URN)10.1016/j.bpj.2014.11.2890 (DOI)000362849600276 ()
Conference
59th Annual Meeting of the Biophysical-Society, Baltimore, February 7-11, 2015
Available from: 2015-03-10 Created: 2015-03-10 Last updated: 2025-02-20Bibliographically approved
Mortezaei, N., Epler, C., Shao, P., Shirdel, M., Bhupender, S., McVeigh, A., . . . Bullitt, E. (2015). Structure and function of enterotoxigenic Escherichia coli fimbriae from differing assembly pathways. Molecular Microbiology, 95(1), 116-126
Open this publication in new window or tab >>Structure and function of enterotoxigenic Escherichia coli fimbriae from differing assembly pathways
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2015 (English)In: Molecular Microbiology, ISSN 0950-382X, E-ISSN 1365-2958, Vol. 95, no 1, p. 116-126Article in journal (Refereed) Published
Abstract [en]

Pathogenic enterotoxigenic Escherichia coli (ETEC) are the major bacterial cause of diarrhea in young children in developing countries and in travelers, causing significant mortality in children. Adhesive fimbriae are a prime virulence factor for ETEC, initiating colonization of the small intestinal epithelium. Similar to other Gram-negative bacteria, ETEC express one or more diverse fimbriae, some assembled by the chaperone-usher pathway and others by the alternate chaperone pathway. Here, we elucidate structural and biophysical aspects and adaptations of each fimbrial type to its respective host niche. CS20 fimbriae are compared with colonization factor antigen I (CFA/I) fimbriae, which are two ETEC fimbriae assembled via different pathways, and with P-fimbriae from uropathogenic E.coli. Many fimbriae unwind from their native helical filament to an extended linear conformation under force, thereby sustaining adhesion by reducing load at the point of contact between the bacterium and the target cell. CFA/I fimbriae require the least force to unwind, followed by CS20 fimbriae and then P-fimbriae, which require the highest unwinding force. We conclude from our electron microscopy reconstructions, modeling and force spectroscopy data that the target niche plays a central role in the biophysical properties of fimbriae that are critical for bacterial pathophysiology.

Place, publisher, year, edition, pages
John Wiley & Sons, 2015
Keywords
fimbriae, pili, macromolecules, optical tweezers
National Category
Other Physics Topics Medical and Health Sciences
Identifiers
urn:nbn:se:umu:diva-95561 (URN)10.1111/mmi.12847 (DOI)000346656200008 ()25355550 (PubMedID)2-s2.0-84919354173 (Scopus ID)
Funder
Swedish Research Council, 621-2013-5379
Available from: 2014-10-31 Created: 2014-10-31 Last updated: 2024-07-02Bibliographically approved
Chai, Q., Singh, B., Peisker, K., Metzendorf, N., Ge, X., Dasgupta, S. & Sanyal, S. (2014). Organization of ribosomes and nucleoids in Escherichia coli cells during growth and in quiescence.. Journal of Biological Chemistry, 289(16), 11342-52
Open this publication in new window or tab >>Organization of ribosomes and nucleoids in Escherichia coli cells during growth and in quiescence.
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2014 (English)In: Journal of Biological Chemistry, ISSN 0021-9258, E-ISSN 1083-351X, Vol. 289, no 16, p. 11342-52Article in journal (Refereed) Published
Abstract [en]

We have examined the distribution of ribosomes and nucleoids in live Escherichia coli cells under conditions of growth, division, and in quiescence. In exponentially growing cells translating ribosomes are interspersed among and around the nucleoid lobes, appearing as alternative bands under a fluorescence microscope. In contrast, inactive ribosomes either in stationary phase or after treatment with translation inhibitors such as chloramphenicol, tetracycline, and streptomycin gather predominantly at the cell poles and boundaries with concomitant compaction of the nucleoid. However, under all conditions, spatial segregation of the ribosomes and the nucleoids is well maintained. In dividing cells, ribosomes accumulate on both sides of the FtsZ ring at the mid cell. However, the distribution of the ribosomes among the new daughter cells is often unequal. Both the shape of the nucleoid and the pattern of ribosome distribution are also modified when the cells are exposed to rifampicin (transcription inhibitor), nalidixic acid (gyrase inhibitor), or A22 (MreB-cytoskeleton disruptor). Thus we conclude that the intracellular organization of the ribosomes and the nucleoids in bacteria are dynamic and critically dependent on cellular growth processes (replication, transcription, and translation) as well as on the integrity of the MreB cytoskeleton.

National Category
Natural Sciences
Identifiers
urn:nbn:se:umu:diva-95604 (URN)10.1074/jbc.M114.557348 (DOI)24599955 (PubMedID)2-s2.0-84898985090 (Scopus ID)
Available from: 2014-11-03 Created: 2014-11-03 Last updated: 2023-03-24Bibliographically approved
Singh, B., Nitharwal, R. G., Ramesh, M., Pettersson, B. M., Kirsebom, L. A. & Dasgupta, S. (2013). Asymmetric growth and division in Mycobacterium spp.: compensatory mechanisms for non-medial septa.. Molecular Microbiology, 88(1), 64-76
Open this publication in new window or tab >>Asymmetric growth and division in Mycobacterium spp.: compensatory mechanisms for non-medial septa.
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2013 (English)In: Molecular Microbiology, ISSN 0950-382X, E-ISSN 1365-2958, Vol. 88, no 1, p. 64-76Article in journal (Refereed) Published
Abstract [en]

Mycobacterium spp., rod-shaped cells belonging to the phylum Actinomycetes, lack the Min- and Noc/Slm systems responsible for preventing the placement of division sites at the poles or over the nucleoids to ensure septal assembly at mid-cell. We show that the position for establishment of the FtsZ-ring in exponentially growing Mycobacterium marinum and Mycobacterium smegmatis cells is nearly random, and that the cells often divide non-medially, producing two unequal but viable daughters. Septal sites and cellular growth disclosed by staining with the membrane-specific dye FM4-64 and fluorescent antibiotic vancomycin (FL-Vanco), respectively, showed that many division sites were off-centre, often over the nucleoids, and that apical cell growth was frequently unequal at the two poles. DNA transfer through the division septum was detected, and translocation activity was supported by the presence of a putative mycobacterial DNA translocase (MSMEG2690) at the majority of the division sites. Time-lapse imaging of single live cells through several generations confirmed both acentric division site placement and unequal polar growth in mycobacteria. Our evidence suggests that post-septal DNA transport and unequal polar growth may compensate for the non-medial division site placement in Mycobacterium spp.

National Category
Natural Sciences
Identifiers
urn:nbn:se:umu:diva-95608 (URN)10.1111/mmi.12169 (DOI)23387305 (PubMedID)
Available from: 2014-11-03 Created: 2014-11-03 Last updated: 2018-06-07Bibliographically approved
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