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1. Globally, lakes are warming and browning with ongoing climate change. These changes significantly impact a lake's biogeochemical properties and all organisms, including invertebrate consumers. The effects of these changes are essential to understand, especially during critical periods after and before the growing season, that is, autumn and spring, which can determine the composition of the invertebrate consumer community.
2. In this study, we used a large-scale experimental pond system to test the combined effect of warming (+3°C) and increased input of terrestrial and coloured dissolved organic carbon (gradient of 1.6–8.8 mg/L in the ambient and 1.6–9.3 mg/L in the warm)—which causes browning—on zooplankton and benthic macroinvertebrate biomass and composition during the autumn and the following spring.
3. Total zooplankton biomass decreased with warming and increased with browning, while total zoobenthos did not respond to either treatment. Warming and browning throughout the autumn had no overall interactive effects on zooplankton or zoobenthos. Autumnal warming decreased total pelagic consumer biomass, caused by a decrease in both Rotifera and Copepoda. In contrast, there was no effect on overall benthic consumer biomass, with only Asellus sp. biomass showing a negative response to warming. An autumnal increase in dissolved organic carbon led to increased total pelagic consumer biomass, which was related to increases in Daphnia sp. biomass but did not affect zoobenthos biomass. While we expected zooplankton and zoobenthos biomass to follow responses in primary and bacterial production to treatments, we did not find any relationship between consumer groups and these estimates of resource production.
4. Our results suggest that consumer responses to warming and browning during autumn may lead to less overarching general changes in consumer biomass, and responses are mostly taxon-specific.
5. This study gives novel insights into the effects of warming and browning on consumer biomass during autumn and spring and increases the understanding of the effects of climate change on invertebrate community biomass in the different habitats.

Gross primary production (GPP) by benthic microalgae growing on soft sediments is an important contributor to lake productivity in many lakes world-wide. As benthic microalgae have access to nutrients in the sediment they have been regarded as primarily controlled by light, while the role of CO2 as a limiting factor for benthic GPP in lake ecosystems is largely unknown.

In this study, we experimentally tested for CO2 limitation of benthic GPP by collecting littoral surface sediments, with associated benthic microalgae, from a typical boreal lake. Intact sediment cores were incubated at different depths (light conditions) after addition of dissolved inorganic (bicarbonate) or organic (DOC; glucose) carbon as direct and indirect sources of CO2, respectively.

Benthic microalgal GPP was stimulated by both dissolved inorganic carbon and DOC additions at high, but not at low, light levels.

This study shows that benthic microalgal GPP can be CO2-limited when light is not limiting and suggests that both direct (e.g., via groundwater inflow) and indirect (via mineralisation of DOC) CO2 supply can stimulate benthic GPP.

Climate changes are predicted to influence gross primary production (GPP) of lakes directly through warming and indirectly through increased loads of allochthonous coloured dissolved organic matter (cDOM) from surrounding landscapes. However, few studies have investigated this combined effect.

Here we tested the effects of warming (elevated 3celcius) and cDOM input (three levels of humic river water addition) on GPP in autumn (2 months including open water and ice-covered periods) in experimental pond ecosystems.

The cDOM input decreased whole-ecosystem GPP at natural temperature conditions mainly as a result of lower benthic GPP not fully counteracted by an increase in pelagic GPP, while warming increased whole-ecosystem GPP due to a positive response of mainly pelagic GPP at all levels of cDOM input.

Warming delayed autumn ice cover formation by 2 weeks but did not affect light availability in the water column compared to ambient ice-covered treatments. Gross primary production during this period was still affected by warming and cDOM.

The results stress the importance of accounting for multiple climate drivers and habitats when predicting lake GPP responses to climate change. We conclude that climate change may shift whole-ecosystem GPP through different responses of habitat-specific GPP to increasing cDOM inputs and warming.

Climate warming is predicted to affect northern lake food webs in two ways: (1)directly via changes in water temperature and ice conditions, and (2) indirectlyvia changes in catchment characteristics and processes that influence input ofallochthonous coloured dissolved organic matter (cDOM) and nutrients. Input ofcDOM increases carbon dioxide (CO2) availability, causes brownification andreduced light conditions, and may increase nutrient availability especially forpelagic primary producers. Increased water temperature and light penetrationand longer ice-free periods affect metabolic rates. These changes are expected toinfluence gross primary production (GPP) and growth of higher trophic levels.However, majority of studies focus on pelagic processes and net effects at wholelake scale is not well understood. Consequently, the lack of knowledge of whatfactors control benthic GPP makes predictions of net effects of climate change onwhole-ecosystem GPP spurious. The aim of this thesis was to experimentally testeffects of warming and increased input of allochthonous cDOM on habitatspecific and whole-ecosystem GPP in lakes. First, by manipulating the CO2concentrations in large scale pond ecosystems, we showed that increased CO2stimulated whole-ecosystem GPP. In a separate incubation study with naturallake sediments in a boreal lake, we tested the role of CO2 as a limiting factor forbenthic GPP under different light levels. The results showed that CO2 supplystimulated benthic GPP at high but not at low light availability, suggesting thatbenthic GPP can be CO2-limited. In the same experimental pond ecosystems, thecombined effect of increased allochthonous cDOM and warming (+3.5°C) on GPPwas studied. The results showed that cDOM input decreases whole-ecosystemGPP, mainly as a result of decreased benthic GPP due to light limitation not fullycounteracted by an increase in pelagic GPP under ambient conditions. Warmingon the other caused a hump shaped increase in whole-ecosystem GPP withincreasing cDOM input mainly due to a positive response in pelagic GPP due torelaxed nutrient limitation. Finally, by manipulating the fish consumer biomassin the same experimental pond ecosystems we showed that whole-ecosystem GPPcan be controlled by top-down effects under warm (+ 3.0°C) but not ambienttemperature conditions. The decline in whole-ecosystem GPP was mainlyattributed to a warming-stimulated consumer-driven trophic cascade in thepelagic habitat and top-down control by zooplankton on phytoplankton growth,while no corresponding cascade was evident in the benthic habitat.Taken together, the results suggest that climate change impacts, as increasinginputs of cDOM, warming and changes in food webs, have different effects onhabitat specific GPP and alone or in combination have impacts on whole-lakeGPP. This thesis offers important insights to better understand the factors thatcontrol lake GPP and to predict future lake ecosystem responses to environmentalchange.

Gross primary production (GPP) is a fundamental ecosystem process that sequesters carbon dioxide (CO₂) and forms the resource base for higher trophic levels. Still, the relative contribution of different controls on GPP at the whole-ecosystem scale is far from resolved. Here we show, by manipulating CO₂ concentrations in large-scale experimental pond ecosystems, that CO₂ availability is a key driver of whole-ecosystem GPP. This result suggests we need to reformulate past conceptual models describing controls of lake ecosystem productivity and include our findings when developing models used to predict future lake ecosystem responses to environmental change.