Umeå University's logo

umu.sePublikasjoner
Endre søk
RefereraExporteraLink to record
Permanent link

Direct link
Referera
Referensformat
  • apa
  • ieee
  • vancouver
  • Annet format
Fler format
Språk
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Annet språk
Fler språk
Utmatningsformat
  • html
  • text
  • asciidoc
  • rtf
Extending evolutionary forecasts across bacterial species
Umeå universitet, Medicinska fakulteten, Institutionen för molekylärbiologi (Medicinska fakulteten). Los Alamos National Laboratory, NM, Los Alamos, United States.ORCID-id: 0000-0002-8186-3005
Umeå universitet, Medicinska fakulteten, Institutionen för molekylärbiologi (Medicinska fakulteten).
Umeå universitet, Medicinska fakulteten, Institutionen för molekylärbiologi (Medicinska fakulteten).
Umeå universitet, Medicinska fakulteten, Umeå Centre for Microbial Research (UCMR). Umeå universitet, Teknisk-naturvetenskapliga fakulteten, Institutionen för molekylärbiologi (Teknisk-naturvetenskaplig fakultet).ORCID-id: 0000-0003-1510-8324
2024 (engelsk)Inngår i: Proceedings of the Royal Society of London. Biological Sciences, ISSN 0962-8452, E-ISSN 1471-2954, Vol. 291, nr 2036, artikkel-id 20242312Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

Improving evolutionary forecasting requires progressing from studying repeated evolution of a single genotype under identical conditions to formulating broad principles. These principles should enable predictions of how similar species will adapt to similar selective pressures. Evolve-and-resequence experiments with multiple species allow testing forecasts on different biological levels and elucidating the causes for failed predictions. Here, we show that forecasts for adaptation to static culture conditions can be extended to multiple species by testing previous predictions for Pseudomonas syringae and Pseudomonas savastanoi. In addition to sequence divergence, these species differ in their repertoire of biofilm regulatory genes and structural components. Consistent with predictions, both species repeatedly produced biofilm mutants with a wrinkly spreader phenotype. Predominantly, mutations occurred in the wsp operon, with less frequent promoter mutations near uncharacterized diguanylate cyclases. However, mutational patterns differed on the gene level, which was explained by a lack of conservation in relative fitness of mutants between more divergent species. The same mutation was the most frequent for both species suggesting that conserved mutation hotspots can increase parallel evolution. This study shows that evolutionary forecasts can be extended across species, but that differences in the genotype-phenotype-fitness map and mutational biases limit predictability on a detailed molecular level.

sted, utgiver, år, opplag, sider
Royal Society Publishing , 2024. Vol. 291, nr 2036, artikkel-id 20242312
Emneord [en]
c-di-GMP, evolutionary predictability, experimental evolution, Pseudomonas savastanoi, Pseudomonas syringae, wrinkly spreader
HSV kategori
Identifikatorer
URN: urn:nbn:se:umu:diva-233547DOI: 10.1098/rspb.2024.2312ISI: 001377212400013PubMedID: 39657800Scopus ID: 2-s2.0-85212245196OAI: oai:DiVA.org:umu-233547DiVA, id: diva2:1926314
Tilgjengelig fra: 2025-01-10 Laget: 2025-01-10 Sist oppdatert: 2025-02-20bibliografisk kontrollert

Open Access i DiVA

fulltext(1786 kB)95 nedlastinger
Filinformasjon
Fil FULLTEXT01.pdfFilstørrelse 1786 kBChecksum SHA-512
4fbcbe352cf401b74b094fac79dd0f9e95e6ea6712e74fe6d8cd6941e058e44fad819427fc8a0734165538777609a9f835b8a256d55dd50b8152124be7cd08bd
Type fulltextMimetype application/pdf

Andre lenker

Forlagets fulltekstPubMedScopus

Person

Pentz, Jennifer T.Lind, Peter A

Søk i DiVA

Av forfatter/redaktør
Pentz, Jennifer T.Biswas, AparnaLind, Peter A
Av organisasjonen
I samme tidsskrift
Proceedings of the Royal Society of London. Biological Sciences

Søk utenfor DiVA

GoogleGoogle Scholar
Totalt: 95 nedlastinger
Antall nedlastinger er summen av alle nedlastinger av alle fulltekster. Det kan for eksempel være tidligere versjoner som er ikke lenger tilgjengelige

doi
pubmed
urn-nbn

Altmetric

doi
pubmed
urn-nbn
Totalt: 456 treff
RefereraExporteraLink to record
Permanent link

Direct link
Referera
Referensformat
  • apa
  • ieee
  • vancouver
  • Annet format
Fler format
Språk
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Annet språk
Fler språk
Utmatningsformat
  • html
  • text
  • asciidoc
  • rtf