Umeå universitets logga

umu.sePublikationer
Ändra sökning
RefereraExporteraLänk till posten
Permanent länk

Direktlänk
Referera
Referensformat
  • apa
  • ieee
  • vancouver
  • Annat format
Fler format
Språk
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Annat språk
Fler språk
Utmatningsformat
  • html
  • text
  • asciidoc
  • rtf
Landscape of protein-protein interactions during hepatitis C virus assembly and release
Institute of Experimental Virology, TWINCORE, Centre for Experimental and Clinical Infection Research, Lower Saxony, Hannover, Germany.
Institute of Experimental Virology, TWINCORE, Centre for Experimental and Clinical Infection Research, Lower Saxony, Hannover, Germany.
RG Experimental Systems Immunology, Max-Planck Institute for Biochemistry, Bavaria, Planegg, Germany.
Institute of Experimental Virology, TWINCORE, Centre for Experimental and Clinical Infection Research, Lower Saxony, Hannover, Germany.
Visa övriga samt affilieringar
2024 (Engelska)Ingår i: Microbiology Spectrum, E-ISSN 2165-0497, Vol. 12, nr 2, artikel-id e0256222Artikel i tidskrift (Refereegranskat) Published
Abstract [en]

Assembly of infectious hepatitis C virus (HCV) particles requires multiple cellular proteins including for instance apolipoprotein E (ApoE). To describe these protein-protein interactions, we performed an affinity purification mass spectrometry screen of HCV-infected cells. We used functional viral constructs with epitope-tagged envelope protein 2 (E2), protein (p) 7, or nonstructural protein 4B (NS4B) as well as cells expressing a tagged variant of ApoE. We also evaluated assembly stage-dependent remodeling of protein complexes by using viral mutants carrying point mutations abrogating particle production at distinct steps of the HCV particle production cascade. Five ApoE binding proteins, 12 p7 binders, 7 primary E2 interactors, and 24 proteins interacting with NS4B were detected. Cell-derived PREB, STT3B, and SPCS2 as well as viral NS2 interacted with both p7 and E2. Only GTF3C3 interacted with E2 and NS4B, highlighting that HCV assembly and replication complexes exhibit largely distinct interactomes. An HCV core protein mutation, preventing core protein decoration of lipid droplets, profoundly altered the E2 interactome. In cells replicating this mutant, E2 interactions with HSPA5, STT3A/B, RAD23A/B, and ZNF860 were significantly enhanced, suggesting that E2 protein interactions partly depend on core protein functions. Bioinformatic and functional studies including STRING network analyses, RNA interference, and ectopic expression support a role of Rad23A and Rad23B in facilitating HCV infectious virus production. Both Rad23A and Rad23B are involved in the endoplasmic reticulum (ER)-associated protein degradation (ERAD). Collectively, our results provide a map of host proteins interacting with HCV assembly proteins, and they give evidence for the involvement of ER protein folding machineries and the ERAD pathway in the late stages of the HCV replication cycle.IMPORTANCEHepatitis C virus (HCV) establishes chronic infections in the majority of exposed individuals. This capacity likely depends on viral immune evasion strategies. One feature likely contributing to persistence is the formation of so-called lipo-viro particles. These peculiar virions consist of viral structural proteins and cellular lipids and lipoproteins, the latter of which aid in viral attachment and cell entry and likely antibody escape. To learn about how lipo-viro particles are coined, here, we provide a comprehensive overview of protein-protein interactions in virus-producing cells. We identify numerous novel and specific HCV E2, p7, and cellular apolipoprotein E-interacting proteins. Pathway analyses of these interactors show that proteins participating in processes such as endoplasmic reticulum (ER) protein folding, ER-associated protein degradation, and glycosylation are heavily engaged in virus production. Moreover, we find that the proteome of HCV replication sites is distinct from the assembly proteome, suggesting that transport process likely shuttles viral RNA to assembly sites.

Ort, förlag, år, upplaga, sidor
American Society for Microbiology, 2024. Vol. 12, nr 2, artikel-id e0256222
Nyckelord [en]
affinity purification, endoplasmic reticulum, ERAD, hepatitis C virus, host-pathogen interactions, HSPA5, lipoproteins, proteomics, Rad23B, viral assembly and release, virus-host interactions
Nationell ämneskategori
Mikrobiologi inom det medicinska området
Identifikatorer
URN: urn:nbn:se:umu:diva-221113DOI: 10.1128/spectrum.02562-22ISI: 001143555400001PubMedID: 38230952Scopus ID: 2-s2.0-85184516987OAI: oai:DiVA.org:umu-221113DiVA, id: diva2:1838917
Forskningsfinansiär
Deutsche Forschungsgemeinschaft (DFG), 158989968Deutsche Forschungsgemeinschaft (DFG), GE 2145/3-2Knut och Alice Wallenbergs StiftelseDeutsche Forschungsgemeinschaft (DFG), 390874280Tillgänglig från: 2024-02-19 Skapad: 2024-02-19 Senast uppdaterad: 2024-02-19Bibliografiskt granskad

Open Access i DiVA

fulltext(4704 kB)175 nedladdningar
Filinformation
Filnamn FULLTEXT01.pdfFilstorlek 4704 kBChecksumma SHA-512
7ae895c3b6f9c61cbe9c90feba630947bc46803d403cc0ca55468c66a3560aba0b831c08e05967c12a466807dcbc905992990d7827e4ed69b80183ac3a48520b
Typ fulltextMimetyp application/pdf

Övriga länkar

Förlagets fulltextPubMedScopus

Person

Gerold, Gisa

Sök vidare i DiVA

Av författaren/redaktören
Gerold, Gisa
Av organisationen
Wallenberg centrum för molekylär medicin vid Umeå universitet (WCMM)Avdelningen för virologi
I samma tidskrift
Microbiology Spectrum
Mikrobiologi inom det medicinska området

Sök vidare utanför DiVA

GoogleGoogle Scholar
Totalt: 177 nedladdningar
Antalet nedladdningar är summan av nedladdningar för alla fulltexter. Det kan inkludera t.ex tidigare versioner som nu inte längre är tillgängliga.

doi
pubmed
urn-nbn

Altmetricpoäng

doi
pubmed
urn-nbn
Totalt: 239 träffar
RefereraExporteraLänk till posten
Permanent länk

Direktlänk
Referera
Referensformat
  • apa
  • ieee
  • vancouver
  • Annat format
Fler format
Språk
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Annat språk
Fler språk
Utmatningsformat
  • html
  • text
  • asciidoc
  • rtf