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Surface analysis of bacterial systems using cryo-X-ray photoelectron spectroscopy
Umeå University, Faculty of Science and Technology, Department of Chemistry. Umeå University, Faculty of Medicine, Umeå Centre for Microbial Research (UCMR).ORCID iD: 0009-0005-8941-9194
Umeå University, Faculty of Science and Technology, Department of Chemistry. Umeå University, Faculty of Medicine, Umeå Centre for Microbial Research (UCMR).ORCID iD: 0000-0002-7912-7447
Umeå University, Faculty of Science and Technology, Department of Chemistry. Umeå University, Faculty of Medicine, Umeå Centre for Microbial Research (UCMR). Department of Microbiology, Virology and Biotechnology, Odessa National I.I.Mechnikov University, Odessa, Ukraine.ORCID iD: 0000-0002-6223-9506
Umeå University, Faculty of Medicine, Department of Molecular Biology (Faculty of Medicine). Umeå University, Faculty of Medicine, Umeå Centre for Microbial Research (UCMR).ORCID iD: 0000-0001-9919-0075
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2020 (English)In: Surface and Interface Analysis, ISSN 0142-2421, E-ISSN 1096-9918, Vol. 52, p. 792-801Article in journal (Refereed) Published
Abstract [en]

Surface analysis of biological systems using XPS often requires dehydration of the sample for it to be compatible with the ultrahigh vacuum of the spectrometer. However, if samples are frozen to liquid-nitrogen temperature prior to and during analysis, water can be retained in the sample and the organization of the sample surface should be preserved to a higher degree than in desiccated samples. This article presents recent developments of cryo-X-ray photoelectron spectroscopy (cryo-XPS) for analyses of hydrated biological samples at liquid nitrogen temperature. We describe experiments on bacterial cells, bacterial biofilms, and bacterial outer membrane vesicles using a variety of bacterial species. Differences and similarities in surface chemistry are monitored depending on growth in liquid culture, on culture plates, as well as in biofilms, and are discussed. Two data treatment methods providing decomposition of the C 1s spectra into lipid, polysaccharide, and peptide/peptidoglycan content are used and compared.

Place, publisher, year, edition, pages
John Wiley & Sons, 2020. Vol. 52, p. 792-801
National Category
Analytical Chemistry Microbiology
Identifiers
URN: urn:nbn:se:umu:diva-173400DOI: 10.1002/sia.6854ISI: 000544872100001Scopus ID: 2-s2.0-85087293673OAI: oai:DiVA.org:umu-173400DiVA, id: diva2:1452344
Funder
Swedish Research Council Formas, 2017-00403The Kempe Foundations, JCK-1720
Note

Special Issue: SI

Available from: 2020-07-06 Created: 2020-07-06 Last updated: 2024-04-09Bibliographically approved
In thesis
1. "Under pressure": interaction between pharmaceuticals and river bacteria
Open this publication in new window or tab >>"Under pressure": interaction between pharmaceuticals and river bacteria
2024 (English)Doctoral thesis, comprehensive summary (Other academic)
Alternative title[sv]
”Pressad” : interaktioner mellan läkemedel och bakterier i vattendrag
Abstract [en]

Pharmaceuticals are often entering the environment without being completely decomposed. Once released in the environment they continue to carry on their main function but instead targeting the inhabitants of the aquatic ecosystem. Our interest was drawn towards the bacteria, that are often present in the environment in the form of biofilms. Despite their small size, they are carrying on important functions for the ecosystem. Any disruption in their work can potentially result a disturbance in the whole ecosystem. Thus, knowing the possible effect of the pharmaceuticals on bacterial biofilms can give us more understanding about the mechanisms that lie beneath pharmaceutical pollution.

Natural degradation processes like photolysis, hydrolysis, and biodegradation can reduce pollutant concentrations. Bacterial biofilms, common in aquatic ecosystems, play a crucial role in pharmaceutical degradation process. The extracellular polymeric substances (EPS) produced by biofilms enhance their tolerance to environmental stressors.

This study focuses on bacterial biofilms chronically exposed to low levels of pharmaceuticals remaining in the treated waste water released from a STP into the Knivsta River, Sweden. Using the sequencing we mapped the species that inhabited the sampling location. Model biofilm consortia were constructed and characterized using various analysis techniques. Experiments investigated bacterial motility, biofilm formation, and interactions between isolates. The bacterial isolates exhibited diverse motility patterns. Cross- cultivation assays indicated coexistence without negative interactions among isolates. Chemical analysis using ATR-FTIR spectroscopy and cryo-XPS revealed differences in macromolecular composition among isolates.

The impact of pharmaceuticals, such as Trimethoprim and Diclofenac, on bacterial growth was studied.

The findings contribute to understanding the complex interactions between pharmaceuticals and bacterial biofilms, crucial for assessing environmental risks and designing possible wastewater treatment strategies.

Place, publisher, year, edition, pages
Umeå: Umeå University, 2024. p. 71
Keywords
Biofilms, river bacteria, pharmaceutical contamination
National Category
Environmental Sciences Other Chemistry Topics
Identifiers
urn:nbn:se:umu:diva-220285 (URN)9789180702836 (ISBN)9789180702843 (ISBN)
Public defence
2024-02-23, Stora hörsalen (KBE303), KBC-huset, Linnaeus väg 6, 90736, Umeå, 13:00 (English)
Opponent
Supervisors
Available from: 2024-02-07 Created: 2024-02-01 Last updated: 2024-02-07Bibliographically approved

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Hagberg, AleksandraRzhepishevska, Olena ICisneros, David A.Ramstedt, Madeleine

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Hagberg, AleksandraRzhepishevska, Olena ISemenets, AnastasiiaCisneros, David A.Ramstedt, Madeleine
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Department of ChemistryUmeå Centre for Microbial Research (UCMR)Department of Molecular Biology (Faculty of Medicine)
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