Umeå University's logo

umu.sePublications
Change search
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf
Error reduction strategies for quantitative PET with focus on hybrid PET/MRI
Umeå University, Faculty of Medicine, Department of Radiation Sciences, Radiation Physics.ORCID iD: 0000-0002-3353-6501
2022 (English)Doctoral thesis, comprehensive summary (Other academic)Alternative title
Felreduktionsstrategier för kvantitativ PET med fokus på PET/MR hybridutrustning (Swedish)
Abstract [en]

Positron Emission Tomography (PET) is an important tool for detection, staging and follow-up in a wide range of diseases, including cancer and neurological disorders. As a functional imaging tool, PET can visualize biological processes, where positron emitting radioactive isotopes are connected to molecules with different functions in the body. While PET-images can be visually interpreted, they can also be used for quantitative measurements, where functions such as glucose metabolism, dopamine receptor function, and blood-flow can be quantified. Measurements can be performed in static imaging, or in dynamic imaging where graphical methods can be used for analysis.

PET images benefit from fusion with anatomical images which facilitates the interpretation. The combination of PET with computed tomography (CT) as in PET/CT hybrid equipment is a well-established imaging method. Magnetic Resonance Imaging (MRI) has some advantages over CT such as the high soft tissue contrast, but the combination with PET in a fully integrated system is far more technically challenging. Most of the technical concerns have been solved, and PET/MRI modalities are now commercially available.

Among the remaining challenges, the attenuation correction is still not yet completely solved, where the attenuation maps on the PET/MRI modalities are approximate and bone is not accounted for in all parts of the body. There are also challenges with quantitative PET in general, where for example low spatial resolution and presence of noise can lead to quantitative errors. The purpose of this thesis was to investigate and develop strategies to reduce quantitative errors in PET imaging with special focus on PET/MRI.

In study I, we studied the limits for quantification of size and uptake in small lesions in PET images reconstructed with a resolution modelling algorithm. We constructed a phantom of small balloons and reconstructed images with three different algorithms and measured volume and activity concentration in the images. The measured activity concentration in the lesions was corrected for the low resolution that yields partial-volume effects (PVE). We found that resolution modelling improved quantification of all lesions, and that in combination with correction factors, lesions larger than ~9 mm diameter could be correctly quantified.

Study II is focused on the effect of frame time length on the graphical Logan-analysis for dynamic studies with 11C-raclopride. Logan analysis is reported to be sensitive to noise, and image noise is heavily dependent on the frame time length. Noise can also generate bias when using iterative reconstruction methods. Weivconcluded that with region-based analyses, a bias of approximately 10% in the non-displaceable binding potential was found when using the shortest time frames, and that the bias was mainly caused by the reconstruction algorithm. Long time frames generated stable parameters.

The last two studies focused on the attenuation correction in PET/MRI hybrid equipment. In study III, a method for attenuation correction in PET/MRI was implemented and evaluated. The method is developed for the pelvic region and is based on statistical decomposition of T2-weighted images. We found that the new method improved quantification, especially in regions in vicinity of bone. In study IV, we proposed a concept for patient-specific quality assurance of attenuation maps, based on measurements of the MRI B0-field. The method shows potential to find errors in the attenuation map related to metallic implants, air, and patient contour.

The work in this thesis has contributed to increased knowledge about the effect of resolution and noise for quantification in PET images. It has also introduced a new method for attenuation correction in PET/MRI, and a concept for quality assurance of PET/MRI attenuation maps.

Place, publisher, year, edition, pages
Umeå: Umeå universitet , 2022. , p. 58
Series
Umeå University medical dissertations, ISSN 0346-6612 ; 2175
Keywords [en]
Positron emission tomography, PET, PET/MR, PET/MRI, medical imaging, partial-volume effect, attenuation correction
National Category
Radiology, Nuclear Medicine and Medical Imaging
Research subject
radiation physics
Identifiers
URN: urn:nbn:se:umu:diva-194023ISBN: 978-91-7855-762-2 (electronic)ISBN: 978-91-7855-761-5 (print)OAI: oai:DiVA.org:umu-194023DiVA, id: diva2:1653563
Public defence
2022-05-20, Hörsal Betula, målpunkt L, Norrlands universitetssjukhus, Umeå, 09:00 (English)
Opponent
Supervisors
Funder
Swedish Cancer SocietyCancerforskningsfonden i NorrlandVästerbotten County CouncilAvailable from: 2022-04-29 Created: 2022-04-22 Last updated: 2022-04-27Bibliographically approved
List of papers
1. Subcentimeter Tumor Lesion Delineation for High-Resolution 18F-FDG PET Images: Optimizing Correction for Partial-Volume Effects
Open this publication in new window or tab >>Subcentimeter Tumor Lesion Delineation for High-Resolution 18F-FDG PET Images: Optimizing Correction for Partial-Volume Effects
Show others...
2013 (English)In: Journal of Nuclear Medicine Technology, ISSN 0091-4916, E-ISSN 1535-5675, Vol. 41, no 2, p. 85-91Article in journal (Refereed) Published
Abstract [en]

In PET, partial-volume effects cause errors in estimation of size and activity for small objects with radiopharmaceutical uptake. Recent methods for image reconstruction, compared with traditional reconstruction techniques, include algorithms for resolution recovery that result in images with higher resolution and enable quantification of size and activity of smaller objects. The purpose of this study was to evaluate a combination of 2 algorithms for volume delineation and partial-volume correction on uptake volumes smaller than 0.7 mL using image reconstruction algorithms with and without resolution recovery.

METHODS: Volumes of interests (VOIs) were delineated using a threshold intensity calculated as a weighted sum of tumor and background intensities. These VOIs were used for calculating correction factors by convolving a tumor mask with the system point-spread function. The methods algorithms were evaluated using a phantom constructed from 5 small different-sized balloons filled with (18)F-FDG in background activity. Six different backgrounds were used. Data were acquired using a PET/CT scanner, and the images were reconstructed using 2 iterative algorithms, one of which used a resolution recovery algorithm.

RESULTS: For the images reconstructed using the resolution recovery algorithm, the method for volume delineation resulted in VOI sizes that were correct within 1 SD for all balloons of a volume of 0.35 mL (equivalent diameter, 8.8 mm) and larger, in all backgrounds. For the images reconstructed without resolution recovery, the VOI sizes were background-dependent and generally less accurate. Correct volume delineations generally led to accurate activity estimates.

CONCLUSION: The algorithms tested on the phantom developed for this study could, for this PET camera and these reconstruction algorithms, be used for accurate volume delineation and activity quantification of lesions 0.35 mL and larger.

Place, publisher, year, edition, pages
Society of Nuclear Medicine and Molecular Imaging, 2013
Keywords
PET, partial-volume effects, partial volume correction, volume delineation, resolution recovery
National Category
Radiology, Nuclear Medicine and Medical Imaging
Identifiers
urn:nbn:se:umu:diva-76744 (URN)10.2967/jnmt.112.117234 (DOI)000439118600008 ()23658206 (PubMedID)2-s2.0-84878873137 (Scopus ID)
Available from: 2013-07-12 Created: 2013-07-12 Last updated: 2023-03-07Bibliographically approved
2. A Study of Dynamic PET Frame-Binning on the Reference Logan Binding Potential
Open this publication in new window or tab >>A Study of Dynamic PET Frame-Binning on the Reference Logan Binding Potential
Show others...
2017 (English)In: IEEE Transactions on Radiation and Plasma Medical Sciences, ISSN 2469-7311, Vol. 1, no 2, p. 128-135Article in journal (Refereed) Published
Abstract [en]

Objective: The reference Logan plot is a tool for determining the non-displaceable binding potential for dynamic PET exams using tracers with reversible bindings. Dynamic frame protocols affect noise in PET images and short frames can lead to quantitative uncertainties and noise-induced reconstruction bias. The aim of this study was to analyze the effect of frame binning on 11C-Raclopride striatal binding potential from reference Logan analysis. Methods: 12 healthy volunteers were scanned in list mode using 11C-raclopride, and the image data were reconstructed into 9 different frame binning schemes whereof 3 clinical schemes. Reconstruction was performed with 3 different algorithms, one based on filtered back projection (FBP) and two based on ordered subset expectation maximization (OSEM); one including resolution recovery. Logan plots were used for calculating the non-displaceable binding potential. Variation in binding potential was evaluated using Students t-tests. Results: It was found that frame lengths of up to 60 s gave significantly different results compared to the reference clinical protocol for OSEM, both with and without resolution recovery (maximum deviation: 10.3 % for the 15 s protocol). For FBP, frame lengths of up to 30 s gave significantly different results with a maximum deviation of 2.8 %. The higher sampling dependence of OSEM compared to FBP is likely due to noise-dependent bias in the OSEM algorithm, most apparent at high noise levels. Conclusions: Bias related to OSEM reconstruction of high-noise data is an important factor for dynamic PET protocols. Time frames of 120 s or more generate the most stable values for the striatum binding potential with the reference Logan plot for 11C-Raclopride brain PET.

Place, publisher, year, edition, pages
IEEE, 2017
Keywords
¹¹C-Raclopride, binding potential, dynamic frame protocol, frame binning, Logan analysis, positron emission tomography, time sampling
National Category
Radiology, Nuclear Medicine and Medical Imaging
Identifiers
urn:nbn:se:umu:diva-146397 (URN)10.1109/TNS.2016.2639560 (DOI)000456142100003 ()2-s2.0-85113947023 (Scopus ID)
Available from: 2018-04-09 Created: 2018-04-09 Last updated: 2023-03-23Bibliographically approved
3. Improved PET/MRI attenuation correction in the pelvic region using a statistical decomposition method on T2-weighted images
Open this publication in new window or tab >>Improved PET/MRI attenuation correction in the pelvic region using a statistical decomposition method on T2-weighted images
Show others...
2020 (English)In: EJNMMI Physics, E-ISSN 2197-7364, Vol. 7, no 1, article id 68Article in journal (Refereed) Published
Abstract [en]

Background: Attenuation correction of PET/MRI is a remaining problem for whole-body PET/MRI. The statistical decomposition algorithm (SDA) is a probabilistic atlas-based method that calculates synthetic CTs from T2-weighted MRI scans. In this study, we evaluated the application of SDA for attenuation correction of PET images in the pelvic region.

Materials and method: Twelve patients were retrospectively selected from an ongoing prostate cancer research study. The patients had same-day scans of [11C]acetate PET/MRI and CT. The CT images were non-rigidly registered to the PET/MRI geometry, and PET images were reconstructed with attenuation correction employing CT, SDA-generated CT, and the built-in Dixon sequence-based method of the scanner. The PET images reconstructed using CT-based attenuation correction were used as ground truth.

Results: The mean whole-image PET uptake error was reduced from - 5.4% for Dixon-PET to - 0.9% for SDA-PET. The prostate standardized uptake value (SUV) quantification error was significantly reduced from - 5.6% for Dixon-PET to - 2.3% for SDA-PET.

Conclusion: Attenuation correction with SDA improves quantification of PET/MR images in the pelvic region compared to the Dixon-based method.

Place, publisher, year, edition, pages
Springer, 2020
Keywords
PET-MRI, PET, Attenuation correction, Pelvis, Prostate cancer
National Category
Radiology, Nuclear Medicine and Medical Imaging
Identifiers
urn:nbn:se:umu:diva-178388 (URN)10.1186/s40658-020-00336-5 (DOI)000595884500002 ()33226495 (PubMedID)2-s2.0-85096433525 (Scopus ID)
Available from: 2021-01-11 Created: 2021-01-11 Last updated: 2024-07-02Bibliographically approved
4. A concept for quality checks of synthetic CT and attenuation maps through B0-maps
Open this publication in new window or tab >>A concept for quality checks of synthetic CT and attenuation maps through B0-maps
Show others...
(English)Manuscript (preprint) (Other academic)
National Category
Radiology, Nuclear Medicine and Medical Imaging
Identifiers
urn:nbn:se:umu:diva-194021 (URN)
Available from: 2022-04-22 Created: 2022-04-22 Last updated: 2024-07-02

Open Access in DiVA

fulltext(1261 kB)429 downloads
File information
File name FULLTEXT01.pdfFile size 1261 kBChecksum SHA-512
67cedec65f0392cc2e2c59264f486456051f0e20cbc231ddda7cc81f3681aaf6c5cb31d5c4ee82d0d2257f9508c4f70289bce858991863b22711a9f1eab9f602
Type fulltextMimetype application/pdf
spikblad(134 kB)98 downloads
File information
File name SPIKBLAD01.pdfFile size 134 kBChecksum SHA-512
edd8630328148139d312faefdcca4b42a10fd0a887445c3dabc3a83512e4ecf839d5490b949631e771cf824f973575e8de935577285a60c9dd8e5555a6c13517
Type spikbladMimetype application/pdf

Authority records

Wallstén, Elin

Search in DiVA

By author/editor
Wallstén, Elin
By organisation
Radiation Physics
Radiology, Nuclear Medicine and Medical Imaging

Search outside of DiVA

GoogleGoogle Scholar
Total: 429 downloads
The number of downloads is the sum of all downloads of full texts. It may include eg previous versions that are now no longer available

isbn
urn-nbn

Altmetric score

isbn
urn-nbn
Total: 867 hits
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf