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Blood-based DNA methylation markers for lung cancer prediction
Genomic Epidemiology Branch, International Agency for Research on Cancer, Lyon, France.
Genomic Epidemiology Branch, International Agency for Research on Cancer, Lyon, France.
Population Health Sciences, Bristol Medical School, University of Bristol, Bristol, United Kingdom; MRC Integrative Epidemiology Unit, Population Health Sciences, Bristol Medical School, University of Bristol, Bristol, United Kingdom.
Umeå University, Faculty of Medicine, Department of Radiation Sciences, Oncology.ORCID iD: 0000-0003-4182-8923
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2024 (English)In: BMJ Oncology, E-ISSN 2752-7948, Vol. 3, no 1, article id e000334Article in journal (Refereed) Published
Abstract [en]

Objective: Screening high-risk individuals with low-dose CT reduces mortality from lung cancer, but many lung cancers occur in individuals who are not eligible for screening. Risk biomarkers may be useful to refine risk models and improve screening eligibility criteria. We evaluated if blood-based DNA methylation markers can improve a traditional lung cancer prediction model.

Methods and analysis: This study used four prospective cohorts with blood samples collected prior to lung cancer diagnosis. The study was restricted to participants with a history of smoking, and one control was individually matched to each lung cancer case using incidence density sampling by cohort, sex, date of blood collection, age and smoking status. To train a DNA methylation-based risk score, we used participants from Melbourne Collaborative Cohort Study-Australia (n=648) and Northern Sweden Health and Disease Study-Sweden (n=380) based on five selected CpG sites. The risk discriminative performance of the methylation score was subsequently validated in participants from European Investigation into Cancer and Nutrition-Italy (n=267) and Norwegian Women and Cancer-Norway (n=185) and compared with that of the questionnaire-based PLCOm2012 lung cancer risk model.

Results: The area under the receiver operating characteristic curve (AUC) for the PLCOm2012 model in the validation studies was 0.70 (95% CI: 0.65 to 0.75) compared with 0.73 (95% CI: 0.68 to 0.77) for the methylation score model (P difference =0.07). Incorporating the methylation score with the PLCOm2012 model did not improve the risk discrimination (AUC: 0.73, 95% CI: 0.68 to 0.77, P difference =0.73).

Conclusions: This study suggests that the methylation-based risk prediction score alone provides similar lung cancer risk-discriminatory performance as the questionnaire-based PLCOm2012 risk model.

Place, publisher, year, edition, pages
BMJ Publishing Group Ltd, 2024. Vol. 3, no 1, article id e000334
Keywords [en]
Biomarkers, Epidemiology, Lung cancer (non-small cell), Lung cancer (small-cell)
National Category
Cancer and Oncology
Identifiers
URN: urn:nbn:se:umu:diva-225956DOI: 10.1136/bmjonc-2024-000334Scopus ID: 2-s2.0-85195040700OAI: oai:DiVA.org:umu-225956DiVA, id: diva2:1868603
Available from: 2024-06-12 Created: 2024-06-12 Last updated: 2024-06-12Bibliographically approved

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Johansson, Mikael

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