Disentangling the process information contained in a diatom sediment signature is crucial for reliable future predictions based on paleolimnological records. In this study, we combine limnological and paleolimnological monitoring to address the fundamental question: Which environmental information is contained in a diatom sediment signal? We compared annual diatom sequential sediment trap records with the diatom record of the annually varved lake sediment of Nylandssjon (northern Sweden) from three meteorologically different years (2012-2014). The seasonal patterns in diatom sedimentation were strikingly different in varve years 2012 and 2014 compared to varve year 2013. In 2012 and 2014, up to 70% of the annual flux occurred in a single spring month and was dominated by Cyclotella glomerata. In contrast, in 2013, peak fluxes were much lower and more annually integrated. Next, we compared the full-year diatom trap results with year round in-lake physical, chemical, and biological monitored parameters, as well as meteorological variables. Annual averages of environmental conditions did not explain the interannual variability in diatom sedimentation. Instead, the seasonality of diatom sedimentation was determined by the timing of the spring diatom bloom relative to lake over-turn in winters with warm vs. cold air temperature. With our combined limnological and paleolimnological monitoring approach, we find that an annual diatom signal can either contain primarily seasonal climate information from a short time period or be annually integrated. We synthesize our results in a novel conceptual model, which describes the response of sediment diatom signals to two distinct sequences of late-winter conditions.