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Intramolecular Povarov Reactions for the Synthesis of Chromenopyridine fused 2-Pyridone Polyheterocycles Binding to α-Synuclein and Amyloid-β fibrils
Umeå University, Faculty of Science and Technology, Department of Chemistry. (Fredrik Almqvist)
Umeå University, Faculty of Science and Technology, Department of Chemistry.
Umeå University, Faculty of Science and Technology, Department of Chemistry. (Fredrik Almqvist)
Umeå University, Faculty of Science and Technology, Department of Chemistry.
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2020 (English)In: Journal of Organic Chemistry, ISSN 0022-3263, E-ISSN 1520-6904, Vol. 85, no 21, p. 14174-14189Article in journal (Other academic) Published
Abstract [en]

A BF3×OEt2 catalyzed intramolecular Povarov reaction was used to synthesize a library of 15 chromenopyridine fused thiazolino-2-pyridone peptidomimetics. The reaction works with a range of O-alkylated salicylaldehydes and amino functionalized thiazolino-2-pyridones, to generate polyheterocycles with diverse substitution. The synthesized compounds were screened for their ability to bind α-synuclein and amyloid β fibrils in vitro. Analogs substituted with a nitro group bind to mature amyloid fibrils, and the activity moreover depends on the positioning of this functional group.

Place, publisher, year, edition, pages
American Chemical Society (ACS), 2020. Vol. 85, no 21, p. 14174-14189
Keywords [en]
Nanofibers, Column chromatography, Peptides and proteins, Mixtures, Alkyls
National Category
Organic Chemistry
Identifiers
URN: urn:nbn:se:umu:diva-174531DOI: 10.1021/acs.joc.0c01699ISI: 000589941700068Scopus ID: 2-s2.0-85095859796OAI: oai:DiVA.org:umu-174531DiVA, id: diva2:1461474
Funder
Swedish Research Council, 2017-02339Swedish Research Council, 2017-00695Swedish Research Council, 2018-04589Knut and Alice Wallenberg Foundation, KAW 2013.0031Göran Gustafsson Foundation for Research in Natural Sciences and MedicineThe Kempe Foundations, SMK-1755Swedish Foundation for Strategic Research , SB12-0070NIH (National Institute of Health), R01AI134847-01A1
Note

Previously included in thesis in manuscript form.

Available from: 2020-08-26 Created: 2020-08-26 Last updated: 2023-03-24Bibliographically approved
In thesis
1. Synthesis of Ring-fused Peptidomimetics: Interacting with Amyloid Fibrils
Open this publication in new window or tab >>Synthesis of Ring-fused Peptidomimetics: Interacting with Amyloid Fibrils
2020 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Parkinson's and Alzheimer's disease are the two most common neurological disorders in humans. Both conditions involve progressive death of neurons in the central nervous system, decline in bodily functions and eventually (and invariably), death. So far, no cure exists and the available treatments can only ease symptoms. Despite substantial investments in research, the biomolecular processes are still far from fully understood. However, both diseases are associated with formation of fibrillar protein aggregates called amyloid deposits. Whereas Alzheimer’s disease involves aggregation of the Tau and Amyloid β proteins, α-Synuclein fibrilization plays a key role in Parkinson's disease. Although they are chemically distinct, the deposits consist of protein fibres with similar morphology and fold. Small molecules, such as the thiazoline fused 2-pyridones herein presented, can interfere with the formation of amyloid fibres, or bind to them. Besides having potential for diagnostication and treatment, such small molecules constitute valuable tool compounds in future research, to unravel the mechanisms of amyloid formation and pathology. The first step towards successful treatment, diagnostication and prevention of Alzheimer's and Parkinson's disease is understanding the causes and underlying mechanisms better. This thesis narrates the synthesis and development of novel chemical structures: multi ring fused peptidomimetics with the ability to bind mature amyloid fibrils, consisting of α-Synuclein or Amyloid β. 

The first project (articles I, III and VI) describes method development for the extension of bicyclic thiazolino 2-pyrdiones by fusion with aromatic nitrogen heterocycles, which enables the desired amyloid binding properties. Derivatisations of the newly generated central scaffold, and variation of the multiple attached substituents, were subsequently performed in efforts to improve binding strength and solubility, and gain selectivity towards certain fibrils. One of the most promising amyloid fibril binders was evaluated in a human cell line and in mice, and found to be protective against accelerator induced neurotoxicity. One pyrimidine fused compound moreover indicated potent inhibition of Amyloid b aggregation. The second project (articles II, IV and V) focuses on development of methods to modify the thiazoline ring. Ring opening induced by electrophiles generates N-alkenyl 2-pyridones but decreases amyloid binding potency. Introduction of a cyclobutane moiety fused with the thiazoline ring is better tolerated, and adds a terminal alkene moiety that can be exploited in future chemical modifications. Expansion of the five membered thiazoline ring to a six membered dihydrothiazine ring, equipped with a nitrophenyl substituent, provides compounds with enhanced fibril binding capacity, which further inhibits Amyloid β fibril formation in vitro. Taken together, the synthetic methodologies allow construction and late stage modification of complex fused heterocycles, with several points of variation. Thus, the developed methods may be of future value in our laboratories and elsewhere.

Place, publisher, year, edition, pages
Umeå: Umeå Universitet, 2020. p. 128
Keywords
organic chemistry, synthesis, peptidomimetics, thiazoline fused 2-pyridones, Alzheimer's disease, Parkinson's disease, Amyloid, Amyloid-beta, alfa-Synuclein, method development
National Category
Organic Chemistry
Research subject
Organic Chemistry
Identifiers
urn:nbn:se:umu:diva-174405 (URN)978-91-7855-351-8 (ISBN)978-91-7855-352-5 (ISBN)
Public defence
2020-09-18, Lilla hörsalen, KBC KB E3 01, Umeå Universitet, Linnaeus väg 10, 907 36, Umeå, 15:28 (English)
Opponent
Supervisors
Funder
Knut and Alice Wallenberg Foundation, KAW 2013.0031The Kempe Foundations, SMK-1755Göran Gustafsson Foundation for Research in Natural Sciences and MedicineNIH (National Institute of Health), R01AI134847-01A1Swedish Foundation for Strategic Research , SB12-0070
Note

Tackar även Forskningsrådet (Swedish Research Council) (2014-04673; 2014-04673; 2017-00695; 2017-02339; 2018-04589), Michael J. Fox Foundation och Erling Perssons stiftelse som ej finns med i listan nedan.

Errata: Digitalt ISBN saknas i tryckt och digital version. 

Available from: 2020-08-28 Created: 2020-08-25 Last updated: 2022-10-31Bibliographically approved

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Adolfsson, Dan E.Tyagi, MohitSingh, PardeepÅdén, JörgenGharibyan, AnnaJayaweera, Sanduni WasanaLindgren, Anders E. G.Olofsson, AndersAlmqvist, Fredrik

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Adolfsson, Dan E.Tyagi, MohitSingh, PardeepÅdén, JörgenGharibyan, AnnaJayaweera, Sanduni WasanaLindgren, Anders E. G.Olofsson, AndersAlmqvist, Fredrik
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