Multi-decoder Networks with Multi-denoising Inputs for Tumor Segmentation
2021 (Engelska)Ingår i: Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries / [ed] Alessandro Crimi, Spyridon Bakas, Springer, 2021, s. 412-423Konferensbidrag, Publicerat paper (Refereegranskat)
Abstract [en]
Automatic segmentation of brain glioma from multimodal MRI scans plays a key role in clinical trials and practice. Unfortunately, manual segmentation is very challenging, time-consuming, costly, and often inaccurate despite human expertise due to the high variance and high uncertainty in the human annotations. In the present work, we develop an end-to-end deep-learning-based segmentation method using a multi-decoder architecture by jointly learning three separate sub-problems using a partly shared encoder. We also propose to apply smoothing methods to the input images to generate denoised versions as additional inputs to the network. The validation performance indicates an improvement when using the proposed method. The proposed method was ranked 2nd in the task of Quantification of Uncertainty in Segmentation in the Brain Tumors in Multimodal Magnetic Resonance Imaging Challenge 2020.
Ort, förlag, år, upplaga, sidor
Springer, 2021. s. 412-423
Serie
Lecture Notes in Computer Science, ISSN 0302-9743, E-ISSN 1611-3349 ; 12658
Nyckelord [en]
Brain tumor segmentation, Deep learning, Ensemble, Medical imaging, MRI, Uncertainty estimation
Nationell ämneskategori
Medicinsk bildvetenskap Datorgrafik och datorseende
Identifikatorer
URN: urn:nbn:se:umu:diva-186225DOI: 10.1007/978-3-030-72084-1_37ISI: 000892566900037Scopus ID: 2-s2.0-85106168970ISBN: 9783030720834 (tryckt)OAI: oai:DiVA.org:umu-186225DiVA, id: diva2:1580886
Konferens
6th International MICCAI Brainlesion Workshop, BrainLes 2020 Held in Conjunction with 23rd Medical Image Computing for Computer Assisted Intervention Conference, MICCAI 2020, Lima, Peru, October 4, 2020
Forskningsfinansiär
Cancerforskningsfonden i NorrlandRegion VästerbottenVinnova
Anmärkning
Also part of the Image Processing, Computer Vision, Pattern Recognition, and Graphics book sub series (LNIP, volume 12658)
2021-07-162021-07-162025-02-09Bibliografiskt granskad