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Development and Evaluation of Tools to Explore Posttranslational HexNAc-Tyrosine and Mucin-Type O-Glycosylation
Umeå University, Faculty of Science and Technology, Department of Chemistry. (Westerlind)ORCID iD: 0000-0002-9835-7045
2021 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Glycosylation is the most abundant form of post-translational modification (PTM). Recently, O-glycosylation attracted much attention in the glycoproteomic field due to its association with various diseases, such as pathogenic infections and cancer. However, glycoproteomic analysis of O-linked glycosylation is highly challenging due its structural diversity and complexity. New and efficient methods need to be developed to obtain a better understanding of the biological functions of O-glycans. In the presented thesis, glycopeptide microarrays were used as tools to explore the role of mucin type O-glycosylation in cancer, bacterial adhesion processes and galectin recognition on a molecular level, and to get insights into a new group of tyrosine O-glycosylation. A better understanding of these carbohydrate-protein interactions on a molecular level could facilitate the development of glycomimetic inhibitors to fight bacterial infections or block glycan binding proteins involved in cancer progression, or improve the design of novel carbohydrate-based cancer vaccines.

In the first part of this work, tools were developed to elucidate the role of a novel group of PTMs, where N-acetylhexosamine (HexNAc = α-GalNAc, α- or β-GlcNAc) was found to modify the hydroxyl group of tyrosine. Synthetic glycopeptides carrying this new modification, as well as glycopeptide microarray libraries were prepared to evaluate the abilities of plant lectins (carbohydrate-binding proteins) to detect HexNAc-O-Tyr modifications. These lectins are commonly used in glycoproteomic work flows to detect and enrich glycopeptides and -proteins. Additionally, HexNAc-O-Tyr-specific rabbit antibodies were raised and immunologically analyzed by enzyme-linked immunosorbent assays, western blot and microarray binding studies.

In the second part of the presented thesis, synthetic mucin glycopeptide microarray libraries were prepared and employed to explore carbohydrate-protein interactions of galectins, bacterial lectins and tumor specific antibodies. Mucin glycoproteins are part of the mucus barrier that protects the host against invading pathogens. However, bacteria and viruses have co-evolved with the human host and have developed strategies to promote virulence, for example by adhering to glycans on the host cell-surface. To combat bacterial infections, their virulence and pathogenicity must be understood on a molecular level. In this work, mucin glycopeptides were enzymatically modified with different fucose motifs and used to determine the fine binding specificities of fucose-recognizing lectins LecB from Pseudomonas aeruginosa and the Clostridium difficile toxin A. Furthermore, a synthesis strategy was developed to generate simplified mucin core glycopeptides that could be used as scaffolds to enzymatically generate LacdiNAc modified glycopeptides. They could be used in microarray binding studies to evaluate the glycan binding preferences of various proteins, including the Helicobacter pylori lectin LabA and human galectins, which play roles in cancer development and progression. Aberrant glycosylation of mucin glycoproteins has been associated with various types of cancer. Tumor specific carbohydrate antigens on mucins represent attractive antigenic targets for the development of effective anti-cancer vaccines. In this work, antibodies induced by tumor-associated MUC1 glycopeptide-bacteriophage Qβ vaccine conjugates were immunologically analyzed using MUC1 glycopeptide microarray libraries.

Place, publisher, year, edition, pages
Umeå: Umeå University , 2021. , p. 171
Keywords [en]
Glycopeptides, mucins, mucin type-O-glycosylation, microarrays, tyrosine-O-HexNAcylation, lectins, MUC1 cancer vaccines, TcdA, LecB, galectins, LacdiNAc, antibodies
National Category
Organic Chemistry
Research subject
biological chemistry; Biorganic Chemistry; Organic Chemistry
Identifiers
URN: urn:nbn:se:umu:diva-187282ISBN: 978-91-7855-646-5 (print)ISBN: 978-91-7855-647-2 (electronic)OAI: oai:DiVA.org:umu-187282DiVA, id: diva2:1591730
Public defence
2021-10-01, Glasburen, Kemiskt Biologiskt Centrum, Linnaeus väg 6, Umeå, 09:00 (English)
Opponent
Supervisors
Available from: 2021-09-10 Created: 2021-09-07 Last updated: 2021-09-09Bibliographically approved
List of papers
1. Antibodies directed against GalNAc- and GlcNAc-O-Tyrosine posttranslational modifications – a new tool for glycoproteomic detection
Open this publication in new window or tab >>Antibodies directed against GalNAc- and GlcNAc-O-Tyrosine posttranslational modifications – a new tool for glycoproteomic detection
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2023 (English)In: Chemistry - A European Journal, ISSN 0947-6539, E-ISSN 1521-3765, Vol. 29, no 29, article id e202300392Article in journal (Refereed) Published
Abstract [en]

In the last decade, it was discovered that protein mucin-type O-glycosylation and O-GlcNAcylation modify Tyr residues besides the well explored Thr and Ser amino acids. Several glycoproteomic studies have identified α-GalNAc-O-Tyr modifications, and studies propose that β-GlcNAc-O-Tyr also exists as a new group of posttranslational modifications (PTMs). Specific bacterial toxins have further been identified to modify host GTPases with α-GlcNAc-O-Tyr to promote bacterial virulence. Despite being identified on numerous proteins, the biological roles, biosynthesis and expression of GalNAc- and GlcNAc-O-Tyr modifications are poorly understood. A major obstacle is the lack of tools to specifically detect and identify proteins containing these modifications. With this in mind, we prepared vaccine constructs and raised antibodies to enable selective detection of proteins carrying these new PTMs. The obtained polyclonal antibody sera were evaluated using ELISA and glycopeptide microarrays and were found to be highly selective for GlcNAc- and GalNAc-O-Tyr glycopeptides over the corresponding Ser- and Thr-modifications. For microarray analysis, synthetic GlcNAc- and GalNAc-O-Tyr Fmoc-amino acids were prepared and applied in Fmoc-SPPS to obtain an extensive O-glycopeptide library. After affinity purification, the antibodies were applied in western blot analysis and showed specific detection of α-GlcNAc-O-Tyr modified RhoA GTPase.

Place, publisher, year, edition, pages
Wiley-VCH Verlagsgesellschaft, 2023
Keywords
antibodies, vaccine, glycoproteomics, glycopeptides, glycosylation, PTM
National Category
Organic Chemistry
Research subject
Biorganic Chemistry; biological chemistry
Identifiers
urn:nbn:se:umu:diva-187279 (URN)10.1002/chem.202300392 (DOI)000970554600001 ()37052513 (PubMedID)2-s2.0-85152586008 (Scopus ID)
Note

Originally included in thesis in manuscript form. 

Available from: 2021-09-07 Created: 2021-09-07 Last updated: 2023-06-19Bibliographically approved
2. Deciphering the Molecular Recognition of GalNAc- and GlcNAc-O-Tyrosine Glycopeptides by Plant Lectins
Open this publication in new window or tab >>Deciphering the Molecular Recognition of GalNAc- and GlcNAc-O-Tyrosine Glycopeptides by Plant Lectins
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(English)Manuscript (preprint) (Other academic)
National Category
Organic Chemistry
Identifiers
urn:nbn:se:umu:diva-187253 (URN)
Available from: 2021-09-07 Created: 2021-09-07 Last updated: 2021-09-07
3. Bacteria Lectin Recognition Towards Fucose Binding Motifs Highlights the Impact of Presenting Mucin Core Glycopeptides
Open this publication in new window or tab >>Bacteria Lectin Recognition Towards Fucose Binding Motifs Highlights the Impact of Presenting Mucin Core Glycopeptides
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(English)Manuscript (preprint) (Other academic)
Abstract [en]

Mucin glycoproteins are essential components of the mucosal protective barrier, which constantly senses and clears the host from pathogens. Throughout evolution, bacteria and virus have developed strategies to modulate and penetrate the mucosal barrier and cause virulence by interacting with the glycans of membrane-bound mucins at the epithelial cell-surface. These interactions may promote bacteria cell-adhesion, biofilm formation, protein toxin delivery, or cause an inflammatory environment. O-fucosylated glycan epitopes are commonly found on mucin glycoproteins, and are key ligands of many bacterial and viral lectins (glycan binding proteins). Herein we describe a chemoenzymatic synthesis strategy to efficiently prepare an extensive library of fucosylated mucin core tandem repeats glycopeptides to elucidate the fine fucose-binding specificities of the Pseudomonas aeruginosa lectin LecB and the Clostridium difficile toxin A. Therefore, glycan core structures were decorated with terminal Lewis and H-antigens, which play critical roles in infection biology. The fucosylated mucin glycopeptides were applied in microarray binding studies to explore the importance of the glycan and peptide backbone presentation of these terminal antigens in binding interactions with the two bacterial lectins. 

Keywords
cose, Glycopeptides, Glycosylation, Lectins, Microarrays 
National Category
Organic Chemistry
Research subject
Biorganic Chemistry
Identifiers
urn:nbn:se:umu:diva-187249 (URN)10.33774/chemrxiv-2021-79qhk (DOI)
Available from: 2021-09-06 Created: 2021-09-06 Last updated: 2021-09-07
4. Synthesis of Simplified Mucin Cores 1-4 MUC1 and MUC5AC Glylcopeptides for Enzymatic Modification with LacdiNAc Motifs
Open this publication in new window or tab >>Synthesis of Simplified Mucin Cores 1-4 MUC1 and MUC5AC Glylcopeptides for Enzymatic Modification with LacdiNAc Motifs
(English)Manuscript (preprint) (Other academic)
National Category
Organic Chemistry
Identifiers
urn:nbn:se:umu:diva-187246 (URN)
Available from: 2021-09-07 Created: 2021-09-07 Last updated: 2021-09-09
5. Binding Specificities of Human Galectins toward Mucin Glycopeptide Libraries
Open this publication in new window or tab >>Binding Specificities of Human Galectins toward Mucin Glycopeptide Libraries
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(English)Manuscript (preprint) (Other academic)
National Category
Organic Chemistry
Identifiers
urn:nbn:se:umu:diva-187251 (URN)
Available from: 2021-09-07 Created: 2021-09-07 Last updated: 2021-09-09
6. Synthesis and Immunological Evaluation of Disaccharide Bearing MUC-1 Glycopeptide Conjugates with Virus-like Particles
Open this publication in new window or tab >>Synthesis and Immunological Evaluation of Disaccharide Bearing MUC-1 Glycopeptide Conjugates with Virus-like Particles
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2019 (English)In: ACS Chemical Biology, ISSN 1554-8929, E-ISSN 1554-8937, Vol. 14, no 10, p. 2176-2184Article in journal (Refereed) Published
Abstract [en]

Mucin-1 (MUC1) is a highly attractive antigenic target for anticancer vaccines. Naturally existing MUC1 can contain multiple types of O-linked glycans, including the Thomsen–Friedenreich (Tf) antigen and the Sialyl Thomsen-nouveau (STn) antigen. In order to target these antigens as potential anticancer vaccines, MUC1 glycopeptides SAPDT*RPAP (T* is the glycosylation site) bearing the Tf and the STn antigen, respectively, have been synthesized. The bacteriophage Qβ carrier is a powerful carrier for antigen delivery. The conjugates of MUC1-Tf and -STn glycopeptides with Qβ were utilized to immunize immune-tolerant human MUC1 transgenic (MUC1.Tg) mice, which elicited superior levels of anti-MUC1 IgG antibodies with titers reaching over 2 million units. The IgG antibodies recognized a wide range of MUC1 glycopeptides bearing diverse glycans. Antibodies induced by Qβ-MUC1-Tf showed strongest binding, with MUC1-expressing melanoma B16-MUC1 cells, and effectively killed these cells in vitro. Vaccination with Qβ-MUC1-Tf first followed by tumor challenge in a lung metastasis model showed significant reductions of the number of tumor foci in the lungs of immunized mice as compared to those in control mice. This was the first time that a MUC1-Tf-based vaccine has shown in vivo efficacy in a tumor model. As such, Qβ-MUC1 glycopeptide conjugates have great potential as anticancer vaccines.

Place, publisher, year, edition, pages
American Chemical Society (ACS), 2019
National Category
Medical Biotechnology (with a focus on Cell Biology (including Stem Cell Biology), Molecular Biology, Microbiology, Biochemistry or Biopharmacy)
Identifiers
urn:nbn:se:umu:diva-165120 (URN)10.1021/acschembio.9b00381 (DOI)000492118500010 ()31498587 (PubMedID)2-s2.0-85073024998 (Scopus ID)
Available from: 2019-11-11 Created: 2019-11-11 Last updated: 2023-03-24Bibliographically approved

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Behren, Sandra

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