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Benthic gross primary production (GPP) is often the most important part of aquatic food webs in northern lakes, which are gradually warming and receiving increased terrestrial colored dissolved organic carbon loadings due to global change. Yet, measurements of benthic GPP are fairly uncommon, and methods and unit dimensions of benthic GPP are unstandardized and rarely compared. In this study, we measured benthic GPP in 27 headwater lakes from three regions in northern Sweden and analyzed potential constraining drivers of benthic GPPz rates at discrete depths and estimates of benthic GPP averages across the whole lake, as well as across the littoral zone. We also compared in situ measurements of benthic GPP averages across the whole lake with modeled values using the “autotrophic structuring model.” We found that benthic GPPz rates were best explained by, and positively related to, available light (i.e., a function of depth and water color) and temperature. Benthic GPP averages across the whole lake, on the contrary, were best explained by the relative size of the littoral area, which is a measure that combines lake bathymetry and water color. The comparison between in situ measured and modeled estimates of benthic GPP averages across the whole lake revealed that (1) the autotrophic structuring model underestimates GPP at low values and overestimates GPP at high values compared with measured data, and that (2) measured values were related to temperature, which is not included as a variable in the autotrophic structuring model. Considering future predicted changes impacting northern latitude lakes, our results suggest that increased lake water temperatures can to some extent mitigate the negative impacts of reduced light availability from lake browning on benthic GPPz rates. The combined impact of these changes on benthic GPP averages across the whole lake will depend on, and be moderated by, lake bathymetry determining the relative size of the littoral area.

Global change affects gross primary production (GPP) in benthic and pelagic habitats of northern lakes by influencing catchment characteristics and lake water biogeochemistry. However, how changes in key environmental drivers manifest and impact total (i.e., benthic + pelagic) GPP and the partitioning of total GPP between habitats represented by the benthic share (autotrophic structuring) is unclear. Using a dataset from 26 shallow lakes located across Arctic, subarctic, and boreal northern Sweden, we investigate how catchment properties (air temperature, land cover, hydrology) affect lake physico-chemistry and patterns of total GPP and autotrophic structuring. We find that total GPP was mostly light limited, due to high dissolved organic carbon (DOC) concentrations originating from catchment soils with coniferous vegetation and wetlands, which is further promoted by high catchment runoff. In contrast, autotrophic structuring related mostly to the relative size of the benthic habitat, and was potentially modified by CO2 fertilization in the subarctic, resulting in significantly higher total GPP relative to the other biomes. Across Arctic and subarctic sites, DIC and CO2 were unrelated to DOC, indicating that external inputs of inorganic carbon can influence lake productivity patterns independent of terrestrial DOC supply. By comparison, DOC and CO2 were correlated across boreal lakes, suggesting that DOC mineralization acts as an important CO2 source for these sites. Our results underline that GPP as a resource is regulated by landscape properties, and is sensitive to large-scale global changes (warming, hydrological intensification, recovery of acidification) that promote changes in catchment characteristics and aquatic physico-chemistry. Our findings aid in predicting global change impacts on autotrophic structuring, and thus community structure and resource use of aquatic consumers in general. Given the similarities of global changes across the Northern hemisphere, our findings are likely relevant for northern lakes globally.