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Genetic studies of zebrafish muscles: clues to protection in muscle disease
Umeå University, Faculty of Medicine, Department of Integrative Medical Biology (IMB). Umeå University, Faculty of Medicine, Department of Clinical Sciences. (Fatima Pedrosa Domellöf)ORCID iD: 0000-0003-0885-6586
2023 (English)Doctoral thesis, comprehensive summary (Other academic)Alternative title
Genetiska studier av zebrafiskarnas muskler : ledtrådar om skydd mot muskeldystrofier (Swedish)
Abstract [en]

Muscular dystrophies (MDs) are caused by dysregulation of over 40 proteins but commonly share features of muscle weakness, myofiber death and regeneration, loss of ambulation and premature death. A MD involves a broken link anywhere in the connection from extracellular matrix through the sarcolemma to the sarcomere. Thus, any protein which is a part of this link causes MD if misfolded, dysregulated or absent. In MD, the most common causes of death are cardiac or respiratory failure, when the muscles involved in these processes fail. Although MDs affect 1:3500-5000 births worldwide there are currently no cures available. Extraocular muscles (EOMs) are strikingly not affected by MDs, however, the mechanisms behind this native resistance remain elusive. We have recently shown that the EOMs cytoskeleton differs significantly from that of other muscles and hypothesized that investigation of their cytoskeleton in MD models would provide important clues. Furthermore, we hypothesized that application of the EOMs strategies to trunk muscle tissue would decrease the detrimental impact of MD overall.

The zebrafish model system has recently increased vastly in popularity, and has quickly become a MD model. Due to its compatibility with the CRISPR/Cas9 method, genetic knockout studies can be utilized to generate novel mutant lines tailored to fit various aspects in studies of the zebrafish skeletal muscle. In this thesis I present nine new zebrafish lines which I used to study muscle biology processes, including muscle regeneration and the EOM cytoskeleton. 

Our results clearly demonstrate the need for understanding compensatory mechanisms in biology. Interestingly, pax3 and pax7 were shown to functionally compensate for each other both in appendicular muscle formation and in muscle regeneration, respectively, two processes where these individual genes have great impact in other organisms. This finding would also prove to be important in aiding our understanding of the EOM biology in adaptive strategies towards MDs. Furthermore, our results show that zebrafish EOMs are a good model to study cytoskeletal composition, as they share important features with human EOMs. Utilizing the CRISPR/Cas9 genome editing technique, I developed several knockout models of cytoskeletal proteins (desmin, obscurin, plectin) and studied their importance for the function of the EOMs.  In studies of zebrafish EOMs lacking obscurin, we found that EOMs functionally adapt their myosin composition over time via upregulation of myh7, a cardiac specific myosin. Furthermore, an RNA-sequencing screen on a CRISPR/Cas9 induced desminopathy model (desma; desmb double mutant) identified several protective genes of interest. We show that a four and a half LIM-domain protein (Fhl2) is upregulated in EOMs in several muscular dystrophy models and that fhl2b protects EOMs from excessive myonuclei turnover and hypertrophy. Furthermore, its ectopic expression in trunk muscle can also protect an additional muscle dystrophy model (dmd) from acute early death, improve myofiber function and stabilize neuromuscular junctions. Importantly, this protein was also detected in both human and mouse EOMs, indicating a potentially conserved role in the EOMs across species.

In summary, we identified several novel strategies of adaptation to disease progression in the EOMs. Together, these findings have contributed significantly to a better understanding of the EOMs and suggest new treatment strategies for MD that may have important future clinical applications.

Place, publisher, year, edition, pages
Umeå: Umeå University, 2023. , p. 75
Series
Umeå University medical dissertations, ISSN 0346-6612 ; 2275
Keywords [en]
zebrafish, muscle, extraocular muscles, intermediate filaments, bioinformatics, genetics, CRISPR/Cas9
National Category
Ophthalmology Cell and Molecular Biology
Research subject
ophthalmology; cell research
Identifiers
URN: urn:nbn:se:umu:diva-218166ISBN: 9789180702362 (print)ISBN: 9789180702379 (electronic)OAI: oai:DiVA.org:umu-218166DiVA, id: diva2:1820308
Public defence
2024-01-26, Aula Biologica - BIO.E.203, Biologihuset, Umeå, 13:00 (English)
Opponent
Supervisors
Available from: 2023-12-21 Created: 2023-12-18 Last updated: 2023-12-19Bibliographically approved
List of papers
1. Genetic compensation between Pax3 and Pax7 in zebrafish appendicular muscle formation
Open this publication in new window or tab >>Genetic compensation between Pax3 and Pax7 in zebrafish appendicular muscle formation
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2022 (English)In: Developmental Dynamics, ISSN 1058-8388, E-ISSN 1097-0177, Vol. 251, no 9, p. 1423-1438Article in journal (Refereed) Published
Abstract [en]

Background: Migrating muscle progenitors delaminate from the somite and subsequently form muscle tissue in distant anatomical regions such as the paired appendages, or limbs. In amniotes, this process requires a signaling cascade including the transcription factor paired box 3 (Pax3).

Results: In this study, we found that, unlike in mammals, pax3a/3b double mutant zebrafish develop near to normal appendicular muscle. By analyzing numerous mutant combinations of pax3a, pax3b and pax7a, and pax7b, we determined that there is a feedback system and a compensatory mechanism between Pax3 and Pax7 in this developmental process, even though Pax7 alone is not required for appendicular myogenesis. pax3a/3b/7a/7b quadruple mutant developed muscle-less pectoral fins.

Conclusions: We found that Pax3 and Pax7 are redundantly required during appendicular myogenesis in zebrafish, where Pax7 is able to activate the same developmental programs as Pax3 in the premigratory progenitor cells.

Place, publisher, year, edition, pages
John Wiley & Sons, 2022
Keywords
appendicular myogenesis, limb development, muscle regeneration
National Category
Cell and Molecular Biology
Identifiers
urn:nbn:se:umu:diva-187293 (URN)10.1002/dvdy.415 (DOI)000691719300001 ()34435397 (PubMedID)2-s2.0-85113911054 (Scopus ID)
Funder
Swedish Cancer SocietyUmeå University
Note

Special Issue

Available from: 2021-09-07 Created: 2021-09-07 Last updated: 2023-12-18Bibliographically approved
2. Absence of Desmin in Myofibers of the Zebrafish Extraocular Muscles
Open this publication in new window or tab >>Absence of Desmin in Myofibers of the Zebrafish Extraocular Muscles
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2020 (English)In: Translational Vision Science & Technology, E-ISSN 2164-2591, Vol. 9, no 10, article id 1Article in journal (Refereed) Published
Abstract [en]

Purpose: To study the medial rectus (MR) muscle of zebrafish (Danio rerio) with respect to the pattern of distribution of desmin and its correlation to distinct types of myofibers and motor endplates.

Methods: The MRs of zebrafish were examined using confocal microscopy in whole-mount longitudinal specimens and in cross sections processed for immunohistochemistry with antibodies against desmin, myosin heavy chain isoforms, and innervation markers. Desmin patterns were correlated to major myofiber type and type of innervation. A total of 1382 myofibers in nine MR muscles were analyzed.

Results: Four distinct desmin immunolabeling patterns were found in the zebrafish MRs. Approximately a third of all slow myofibers lacked desmin, representing 8.5% of the total myofiber population. The adult zebrafish MR muscle displayed en grappe, en plaque, and multiterminal en plaque neuromuscular junctions (NMJs) with intricate patterns of desmin immunolabeling.

Conclusions: The MRs of zebrafish showed important similarities with the human extraocular muscles with regard to the pattern of desmin distribution and presence of the major types of NMJs and can be regarded as an adequate model to further study the role of desmin and the implications of heterogeneity in cytoskeletal protein composition.

Translational Relevance: The establishment of a zebrafish model to study the cytoskeleton in muscles that are particularly resistant to muscle disease opens new avenues to understand human myopathies and muscle dystrophies and may provide clues to new therapies.

Place, publisher, year, edition, pages
Association for Research in Vision and Ophthalmology, 2020
Keywords
extraocular muscles, desmin, neuromuscular junction, myosin heavy chain, zebrafish, multiterminal en plaque endplates
National Category
Ophthalmology
Identifiers
urn:nbn:se:umu:diva-177160 (URN)10.1167/tvst.9.10.1 (DOI)000587388500001 ()32953241 (PubMedID)2-s2.0-85093896190 (Scopus ID)
Available from: 2020-12-08 Created: 2020-12-08 Last updated: 2023-12-18Bibliographically approved
3. Obscurin maintains myofiber identity in extraocular muscles
Open this publication in new window or tab >>Obscurin maintains myofiber identity in extraocular muscles
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2024 (English)In: Investigative Ophthalmology and Visual Science, ISSN 0146-0404, E-ISSN 1552-5783, Vol. 65, no 2, article id 19Article in journal (Refereed) Published
Abstract [en]

Purpose: The cytoskeleton of the extraocular muscles (EOMs) is significantly different from that of other muscles. We aimed to investigate the role of obscurin, a fundamental cytoskeletal protein, in the EOMs.

Methods: The distribution of obscurin in human and zebrafish EOMs was compared using immunohistochemistry. The two obscurin genes in zebrafish, obscna and obscnb, were knocked out using CRISPR/Cas9, and the EOMs were investigated using immunohistochemistry, qPCR, and in situ hybridization. The optokinetic reflex (OKR) in five-day-old larvae and adult obscna−/−;obscnb−/− and sibling control zebrafish was analyzed. Swimming distance was recorded at the same age.

Results: The obscurin distribution pattern was similar in human and zebrafish EOMs. The proportion of slow and fast myofibers was reduced in obscna−/−;obscnb−/− zebrafish EOMs but not in trunk muscle, whereas the number of myofibers containing cardiac myosin myh7 was significantly increased in EOMs of obscurin double mutants. Loss of obscurin resulted in less OKRs in zebrafish larvae but not in adult zebrafish.

Conclusions: Obscurin expression is conserved in normal human and zebrafish EOMs. Loss of obscurin induces a myofiber type shift in the EOMs, with upregulation of cardiac myosin heavy chain, myh7, showing an adaptation strategy in EOMs. Our model will facilitate further studies in conditions related to obscurin.

Place, publisher, year, edition, pages
Association for Research in Vision and Ophthalmology, 2024
Keywords
extraocular muscles, myofiber, myosin heavy chain 7, obscurin, zebrafish
National Category
Ophthalmology
Identifiers
urn:nbn:se:umu:diva-218165 (URN)10.1167/iovs.65.2.19 (DOI)001209302600002 ()38334702 (PubMedID)2-s2.0-85184789466 (Scopus ID)
Funder
Swedish Research Council, 2018-02401Umeå UniversityRegion VästerbottenUmeå University, FS 2.1.6-1911-22Stiftelsen Kronprinsessan Margaretas arbetsnämnd för synskadade
Note

Originally included in thesis in manuscript form. 

Available from: 2023-12-18 Created: 2023-12-18 Last updated: 2025-04-24Bibliographically approved
4. fhl2b expression ameliorates muscular dystrophy
Open this publication in new window or tab >>fhl2b expression ameliorates muscular dystrophy
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(English)Manuscript (preprint) (Other academic)
National Category
Ophthalmology
Identifiers
urn:nbn:se:umu:diva-218164 (URN)
Available from: 2023-12-18 Created: 2023-12-18 Last updated: 2023-12-18

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